| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0198 |
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| Symbol | rpsH |
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| ID | 5660599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 217133 |
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| End bp | 217525 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641234720 |
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| Product | 30S ribosomal protein S8 |
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| Protein accession | YP_001500062 |
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| Protein GI | 157960028 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0096] Ribosomal protein S8 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000421054 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCATGC AAGATCCTAT TGCGGATATG TTAACACGTA TTCGTAACGG CCAAGCTGCT
AAACACGTAT CTGTGAAGAT GCCATCTGCT AAGCTAAAAA TCGCTATCGC GAAAATGCTT
AAAGAAGAAG GTTATATCAC TGACTACGCC GTAGCAGATG AAGCCAAGCC TGAATTGGAA
ATCACTTTAA AGTATTTCCA AGGTCAGCCA GTCGTTGAGA CTATCCAGCG CGTTAGCCGT
CCTGGTCTTC GTATTTACAA AGGTAAAAAC GAACTTCCAA AGGTTATGGG CGGACTGGGT
GTCGCTATTG TGTCCACTTC TCAAGGTTTG ATGACTGATC GTACTGCCCG CCAAAATGGC
ATGGGTGGGG AAGTTATCTG CTACGTAGCA TAA
|
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| Protein sequence | MSMQDPIADM LTRIRNGQAA KHVSVKMPSA KLKIAIAKML KEEGYITDYA VADEAKPELE
ITLKYFQGQP VVETIQRVSR PGLRIYKGKN ELPKVMGGLG VAIVSTSQGL MTDRTARQNG
MGGEVICYVA
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