| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0190 |
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| Symbol | rpsC |
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| ID | 5660591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 213815 |
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| End bp | 214504 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641234712 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_001500054 |
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| Protein GI | 157960020 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000304143 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGACAGA AAGTACATCC TAATGGTATC CGTCTGGGTA TCACTAAGCC TTGGATCTCG
ACCTGGTACG CTGACAAGTC AGACTATGCC AATAACTTGA GCAGTGACTG GGAAGTGCGT
AAGTTTCTTG AAAAGAAACT TAAGCAAGCA TCAGTTTCTA AGATTGTTAT CGAGCGTCCA
GCTAAGAGTG TTCGCGTAAC TATCCACACA GCCCGTCCAG GTGTTGTGAT TGGTAAGAAA
GGCGAAGACG TTGAGAAGCT ACGCAACGCA GTTGCTAAGC TGACTGGTAT TCCAGCTCAA
ATCAACATCG CTGAGATCCG TAAGCCAGAG CTAGATGCTA AGCTTGTTGC CGATGGCATC
GCTTCGCAGC TAGAGCGTCG TGTTATGTTC CGTCGTGCTA TGAAGCGCGC AGTTCAAAAC
GCAATGCGTC TTGGTGCTAA GGGTATCAAA GTTGAAGTGA GTGGCCGTCT AGGCGGCGCT
GAGATTGCGC GTTCGGAGTG GTATCGTGAA GGTCGTGTAC CTTTGCATAC ACTGCGTGCT
GATATCGACT ATTCTACTTC TGAGAGTCAC ACTCAATACG GTGTGATTGG CGTTAAAGTT
TGGGTCTTCA AAGGCGAAGT TCTAGACGGC GTTCTACCTC AGCATGAAGA GCCGAAACAG
CAGCCGAAGC GTAAGCCTCG CGGTAAATAG
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| Protein sequence | MGQKVHPNGI RLGITKPWIS TWYADKSDYA NNLSSDWEVR KFLEKKLKQA SVSKIVIERP
AKSVRVTIHT ARPGVVIGKK GEDVEKLRNA VAKLTGIPAQ INIAEIRKPE LDAKLVADGI
ASQLERRVMF RRAMKRAVQN AMRLGAKGIK VEVSGRLGGA EIARSEWYRE GRVPLHTLRA
DIDYSTSESH TQYGVIGVKV WVFKGEVLDG VLPQHEEPKQ QPKRKPRGK
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