| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0186 |
|---|
| Symbol | rplW |
|---|
| ID | 5660587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 212020 |
|---|
| End bp | 212322 |
|---|
| Gene Length | 303 bp |
|---|
| Protein Length | 100 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641234708 |
|---|
| Product | 50S ribosomal protein L23 |
|---|
| Protein accession | YP_001500050 |
|---|
| Protein GI | 157960016 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0089] Ribosomal protein L23 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000102577 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAGCG AAGAACGTTT GTTAAAAGTG ATTCTTGCTC CACACATCTC TGAAAAGAGC
ACTGTGAATG CAGAGAAGAA CAATACAGTT GTTTTCCGTG TAGCTATCGA TGCAACTAAA
GCTGAAGTTA AAGCTGCAGT AGCACAGCTA TTCGAAGTTG AAGTCGATTC AGTTCGCACT
TTGGTTAACA AAGGTAAAAC TAAGCGCACT GGTGCCCGTG TTGGCCGCCG TAGCGATTGG
AAAAAAGCCT ATGTTACTTT AGCTGAAGGT GCTGACATCG ATTTCGTCGG CGGCGCTGAA
TAA
|
|---|
| Protein sequence | MISEERLLKV ILAPHISEKS TVNAEKNNTV VFRVAIDATK AEVKAAVAQL FEVEVDSVRT
LVNKGKTKRT GARVGRRSDW KKAYVTLAEG ADIDFVGGAE
|
|---|
| |