| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0180 |
|---|
| Symbol | |
|---|
| ID | 5660581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 206151 |
|---|
| End bp | 206621 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641234702 |
|---|
| Product | 30S ribosomal protein S7 |
|---|
| Protein accession | YP_001500044 |
|---|
| Protein GI | 157960010 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0049] Ribosomal protein S7 |
|---|
| TIGRFAM ID | [TIGR01029] ribosomal protein S7, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00000536383 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAGAC GTCGCGTTGT AGGACAACGT AAAATCCTAC CAGATCCAAA GTTCAAAAGT
GAGTTGCTGG CTAAGTTCAT CAACGTCATC ATGCAGGACG GCAAAAAGTC GACTGCAGAA
AAAATTATCT ACAAGGCACT AGATACTGCG TCTGAAAAGA AAGGCGAAGA TCATTTAGTA
ATCCTTGAAG CAGCCCTGGA CAACGTACGT CCATCAGTCG AGGTTAAATC TCGTCGTGTT
GGTGGTTCTA CTTACCAGGT ACCATGTGAA GTTCGTCCAG TGCGTCGTAA CGCACTAGCG
ATGCGCTGGT TGGTTGAAGC TGCACGTAAG CGTGGTGAAA AATCTATGGC TTTACGTCTA
GCAGGTGAAA TGTTAGACGC ATCTGAAAAC AAAGGTACTG CTGTTAAGAA GCGCGAAGAC
GTGCATCGTA TGGCAGAAGC AAACAAAGCG TTTGCTCATT ACCGCTGGTA A
|
|---|
| Protein sequence | MPRRRVVGQR KILPDPKFKS ELLAKFINVI MQDGKKSTAE KIIYKALDTA SEKKGEDHLV
ILEAALDNVR PSVEVKSRRV GGSTYQVPCE VRPVRRNALA MRWLVEAARK RGEKSMALRL
AGEMLDASEN KGTAVKKRED VHRMAEANKA FAHYRW
|
|---|
| |