| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0179 |
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| Symbol | rpsL |
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| ID | 5660580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 205696 |
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| End bp | 206070 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641234701 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_001500043 |
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| Protein GI | 157960009 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00020988 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAACTG TAAACCAGTT GGTACGTAAG CCTCGCGCAC CGAAAGTCGA TAAGACTAAC
GTTCCTGCGC TAGCTGCGTG TCCACAAAAA CGTGGTGTTT GTACTCGCGT ATACACTACT
ACACCAAAAA AACCTAACTC TGCACTACGT AAAGTAGCTC GTGTGCGTCT AACTAACGGT
TTCGAAGTAA CTTCGTACAT CGGCGGTGAA GGCCACAACC TGCAGGAACA CAGCGTAATT
CTAATCCGTG GCGGTCGTGT AAAAGACTTA CCGGGTGTGC GTTACCACAC TGTACGCGGC
GCATTAGACT GTGCTGGTGT AAGTGAGCGC CGTCAAGGCC GTTCTAAGTA CGGTGCTAAG
CGTCCTAAGT CTTAA
|
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| Protein sequence | MATVNQLVRK PRAPKVDKTN VPALAACPQK RGVCTRVYTT TPKKPNSALR KVARVRLTNG
FEVTSYIGGE GHNLQEHSVI LIRGGRVKDL PGVRYHTVRG ALDCAGVSER RQGRSKYGAK
RPKS
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