| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0175 |
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| Symbol | rplJ |
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| ID | 5660576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 196021 |
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| End bp | 196518 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641234697 |
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| Product | 50S ribosomal protein L10 |
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| Protein accession | YP_001500039 |
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| Protein GI | 157960005 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0244] Ribosomal protein L10 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000220587 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGTTAG GACTCGAAGA CAAAAAAGCG ATTGTTGCTG AAGTCAACGA AGCTGCCAAA
GGTGCTTTAT CTGCAGTAGT AGCCGATTCT CGCGGTGTTA CTGTAGCTAA TATGACCGGA
CTGCGTAAAG CGGCTCGTGA AGCAGGAGTG TACATTCGTG TTGTACGTAA TACTCTTGTT
AAACGTGCTG TTGCTGGTAC TGATTTTGAG TGCCTAAGCG ATACGTTTAC TGGTCCTACT
TTGATTGCAT TCTCTTCTGA GCACCCAGGT GCAGCTGCGC GTCTTCTAAA AGATTTCGCT
AAAGCGCAAG AGAAATTTGA AATCAAAGCA GCAGCCTTTG AAGGGGAATT AATCCCTGCA
GAAAATATTG ATCGTTTAGC AAAACTACCA ACTTACGAAG AAGCACTAGC TCAGTTCATG
ATGACTCTAA AAGAAGCATC TGCTGGCAAG TTCGTTCGTA CATTGGCCGC TCTACGCGAT
CAGAAAGAAG CAGCTTAA
|
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| Protein sequence | MALGLEDKKA IVAEVNEAAK GALSAVVADS RGVTVANMTG LRKAAREAGV YIRVVRNTLV
KRAVAGTDFE CLSDTFTGPT LIAFSSEHPG AAARLLKDFA KAQEKFEIKA AAFEGELIPA
ENIDRLAKLP TYEEALAQFM MTLKEASAGK FVRTLAALRD QKEAA
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