| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0174 |
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| Symbol | rplA |
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| ID | 5660575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 195052 |
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| End bp | 195753 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641234696 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001500038 |
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| Protein GI | 157960004 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000705855 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAAGC TAACTAAACG CGCTCGTCTA ATTCGCGAGA AAGTTGAAGC GACTAAAAGC
TACGACATCA ATGAAGCTGT TGCACTACTT AAAGAACTAG CTACTGCTAA GTTCCTTGAA
AGTGTTGACG TTGCGGTTAA CCTTGGTGTT GATCCACGTA AATCTGACCA AAACGTTCGT
GGCGCTACTG TGCTACCACA CGGTACTGGT CGTGATGTAC GTGTTGCTGT GTTCACTCAA
GGTGCTAACG CTGAAGCTGC TAAAGAAGCT GGTGCTGAGC TTGTTGGTAT GGACGAGCTT
GCTGCGCAAA TTAAAGCTGG CGAAATGAAC TTCGACGTAG TTATCGCATC TCCTGATGCA
ATGCGCGTTG TTGGTATGTT AGGTCAAATC TTAGGCCCAC GTGGTCTTAT GCCTAACCCA
AAAACTGGTA CTGTAACGCC AAACGTTGCT GAAGCAGTTA AGAACGCTAA AGCGGGTCAA
GTACGCTACC GTAACGATAA GAACGGTATC ATCCACACTA CTATCGGTAA AGTGGACTTC
GAACCAGCTC AACTTAAAGA AAACTTAGAA GCACTACTTG GCGCACTTAA AAAAGCCAAG
CCAGCTGCAG CTAAAGGCGT TTTCATTAAG AAAGTAAGCA TCTCTACCAC TATGGGTGCA
GGTGTTGCGG TTGACCAGGG TACTCTGGAC GACGCAAAGT AA
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| Protein sequence | MAKLTKRARL IREKVEATKS YDINEAVALL KELATAKFLE SVDVAVNLGV DPRKSDQNVR
GATVLPHGTG RDVRVAVFTQ GANAEAAKEA GAELVGMDEL AAQIKAGEMN FDVVIASPDA
MRVVGMLGQI LGPRGLMPNP KTGTVTPNVA EAVKNAKAGQ VRYRNDKNGI IHTTIGKVDF
EPAQLKENLE ALLGALKKAK PAAAKGVFIK KVSISTTMGA GVAVDQGTLD DAK
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