| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0173 |
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| Symbol | rplK |
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| ID | 5660574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 194619 |
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| End bp | 195047 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641234695 |
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| Product | 50S ribosomal protein L11 |
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| Protein accession | YP_001500037 |
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| Protein GI | 157960003 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0080] Ribosomal protein L11 |
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| TIGRFAM ID | [TIGR01632] 50S ribosomal protein L11 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000239695 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAAGA AAGTTGATGG TTACATCAAA CTGCAAGTCG CAGCCGGTGC TGCAAACCCG
TCGCCACCAG TAGGCCCAGC ATTGGGTCAG AAAGGTGTTA ACATCATGGA ATTCTGTAAA
GCATTCAACG CTCGTACTGA AAAGTTCGAG AAAGGTATGC CAATTCCTGT AGTTATCACT
GTTTACTCTG ATCGCTCTTT CACTTTCGAA ACTAAGACTC CACCTGCGTC TTTCCTTCTG
CTTAAAGCAG CTGGTCTGAA ATCAGGTTCT GGCCGTCCTA ACACGGAAAA AGTGGGAACT
ATCAAGCGTA GCGCTGTCCA GGAAATTGCT GAGACTAAAG CCGCTGATAT GACTGGTGCT
GATATTGAAG CGATGACTCG CTCAATTGAA GGTACTGCGC GTTCAATGGG TTTGGTAGTA
GAGGACTAA
|
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| Protein sequence | MAKKVDGYIK LQVAAGAANP SPPVGPALGQ KGVNIMEFCK AFNARTEKFE KGMPIPVVIT
VYSDRSFTFE TKTPPASFLL LKAAGLKSGS GRPNTEKVGT IKRSAVQEIA ETKAADMTGA
DIEAMTRSIE GTARSMGLVV ED
|
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