| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0166 |
|---|
| Symbol | |
|---|
| ID | 5660567 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 181132 |
|---|
| End bp | 181587 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 641234679 |
|---|
| Product | RNP-1 like RNA-binding protein |
|---|
| Protein accession | YP_001500030 |
|---|
| Protein GI | 157959996 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0724] RNA-binding proteins (RRM domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000221523 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAAGT CATTCTTGAT CGTATTGGCC GTAGCCATTA TTGGTGCACT CGCTATTTTT
CAAATCGCAC CGGATCTAAA CGGCGCCATC GCTTTCTTTA CTGGTGCTAT CATCGCGAGC
GTTATTTTTT CTCTTCAATC TAAAACGCCT GCTTCTACAA CTAATAGTAA TGAACCATAT
AGCGGTCCAA CCATGACTCT ATATGTAGGT AATCTTCCTT ATCGTGTACA CGAAGGAGAA
GTAAAAGCTC TATTTGGTGA GTTTGGCCCA GTAAACTCTG TACGTTTAGT TCGTGATCGT
AAGACTGGCC GTCGTAAAGG TTTTGGATTT ATTGAAATGT CAGAAGCTGG CGCTAAGAAA
GCTATGACAA AATTGAATGA ATTCGATTTC CAAGAAAGAA CATTAAAAGT GCGTGAGGCT
AAATCTCAAG ATTCCGATAA AAGTGATAAC GCATAA
|
|---|
| Protein sequence | MQKSFLIVLA VAIIGALAIF QIAPDLNGAI AFFTGAIIAS VIFSLQSKTP ASTTNSNEPY
SGPTMTLYVG NLPYRVHEGE VKALFGEFGP VNSVRLVRDR KTGRRKGFGF IEMSEAGAKK
AMTKLNEFDF QERTLKVREA KSQDSDKSDN A
|
|---|
| |