Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0164 |
Symbol | |
ID | 5660565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 179017 |
End bp | 180114 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641234677 |
Product | tRNA (uracil-5-)-methyltransferase |
Protein accession | YP_001500028 |
Protein GI | 157959994 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
TIGRFAM ID | [TIGR02143] tRNA (uracil-5-)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000438982 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAG CAGCAATGGA TCCTACAACC TATGATGTGC AACTAGAAGC AAAGTGCGTC AAGTTAAAGC AGTTATTTGC TGATTTTGAT ACCCCTGAAC TGGAAACATT CAGTTCCGAA CCTGCTCACT ACCGTATGCG TGCTGAGTTT AGAGTTTGGC ATGAAGGTGA AGACCTCTAT TACTATATGT TTGATAAAGA GCTTAATAGT AAAGTTCGTT GTGATCAGTT CCTGCCGGCA AGCGAATTGA TTAATAAAAT GATGCCTGCT TTAGTAGAGT TATTAAAGCC GAATACTATT TTACGCCACC GTCTGTTCCA AATTGATTTC TTGTCCACGC TAAGCGGCGA GATTTTAGTT TCACTGTTAT ATCACAAGCA GCTGGATAGT GAGTGGGAAC AACAGGCTAA AATCCTTAAA CAAACTCTTA GCACCCAGTT TAACGTAAAC TTAATTGGCC GAGCGCGTAA GCAGAAGATC ATCTTTGATA AAGACTTCGT GGTTGAGTCA CTCAATGTTG CTGGCAAACA ACTACAGTAT CATCAGATTG AGAACAGCTT CACTCAGCCA AACGGTAAGG TGTCAGTTAA GATGCTTGAG TGGGCTATTG ATATCACCAA GAATAGCAGT GGTGATCTAC TAGAGCTTTA TTGTGGTAAC GGTAACTTCT CTATCGCGTT AGCACAAAAC TTTGAGCGCG TATTAGCAAC TGAACTGGCC AAGCCTTCTG TTGAGTCAGC GCAATACAAT ATCAAAGTTA ACCAAGTCGA GAACCTGCAG ATCATCCGTA TGTCAGCAGA AGACTTTACC GAAGCTATGG CGAAGAAGCG CAGCTTTAGA CGCTTAGAAG GTATCGATTT AGATAGTTAT AACTGTAATA CCATTTTTGT TGACCCACCA CGAGCTGGGC TAGATGCGGA TACGGTTAAG CTTGTGCAAG GTTATGAGCG TATCGTTTAT ATCTCATGTA ACCCTAATAC CCTTATCGAT AACTTAGCTG AGCTGAGCAA GACCCATAAG ATCACTCGCT TTGCCTTATT CGATCAGTTC CCTTATACGG ATCATATGGA GTCAGGGGTT TTCCTTGAGA AAAAATAA
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Protein sequence | MNLAAMDPTT YDVQLEAKCV KLKQLFADFD TPELETFSSE PAHYRMRAEF RVWHEGEDLY YYMFDKELNS KVRCDQFLPA SELINKMMPA LVELLKPNTI LRHRLFQIDF LSTLSGEILV SLLYHKQLDS EWEQQAKILK QTLSTQFNVN LIGRARKQKI IFDKDFVVES LNVAGKQLQY HQIENSFTQP NGKVSVKMLE WAIDITKNSS GDLLELYCGN GNFSIALAQN FERVLATELA KPSVESAQYN IKVNQVENLQ IIRMSAEDFT EAMAKKRSFR RLEGIDLDSY NCNTIFVDPP RAGLDADTVK LVQGYERIVY ISCNPNTLID NLAELSKTHK ITRFALFDQF PYTDHMESGV FLEKK
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