Gene Spea_0160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0160 
Symbol 
ID5660561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp174763 
End bp175860 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content46% 
IMG OID641234673 
ProducttRNA 2-selenouridine synthase 
Protein accessionYP_001500024 
Protein GI157959990 
COG category[R] General function prediction only 
COG ID[COG2603] Predicted ATPase 
TIGRFAM ID[TIGR03167] tRNA 2-selenouridine synthase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.334237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTCA ATAAAGTGCC CGCAAGCGAA TATCGCCGAA TACTCGTTAA CGATCATCCC 
ATAATGGATG CGCGCGCACC GGTAGAGTTT GAGAAAGGTG CCTTTCCTGC CAGCGTTAAC
CACCCCCTAA TGGAGGATGA GGAGCGTAAA AAGGTGGGTA CTTGCTATAA AGAACATGGC
CAAGAGACCG CGATCAAGCT AGGCCATTCA CTGGTTCAAG GTGAAATCAA GCAACAAAGA
GTCGATGCTT GGCTAGATTT TTTCACTAAG AATCCAGATG GATATCTTTA TTGTTTTCGT
GGTGGCCTAC GTTCACAACT GACCCAGCAA TGGCTAAAAG AAGCAGGCCT AGATATCCCC
TTTATTGAAG GCGGCTATAA GGCCATGCGC CAGTTTCTGA TTGAAACCAT AGATAATGCA
GCCAATGTAA AGCCGATGCT TATCCTAAGC GGAATAACTG GCAGTGGTAA AACTGACTTC
CTTTTGCAGC GTAAAGAAGC CGTTGATCTT GAAGGAATAG CGCACCACAG AGGTTCCAGC
TTTGGTCGCT ATCACGAAGG GCAACCGAGC CAAATCAACT TTGAAAATGC CCTCGCTGTT
GCACTGTTAA AGCATCAAGA CACTGATGCA AAGCACTTGC TACTCGAAGA TGAAAGCTTC
CTGATTGGTC GTTCTGCATT ACCCCAGGCT TTCTATTCAG GCATGCAGAC AGCCAGCGTA
TTGGTGTTAG AAGAGTCGAT GGATGCAAGA CTGACGCGCC TACTTAACGA ATATGTGCAC
AAGATGCATA GTGGTTATAT CCAAAGGCTA GGTGAAGAAG CAGGCTTCGA AGCTTTTGCC
CAATACTTGG CCCAAAGCAT CACAGGCATT AAAAAGCGCC TAGGTGGAAA ACAACATGAC
GAGCTTCAGG CAATGATCAC TGATGCCTTA AGTATTCAAA CGAGTCAAAA TGACACCCGT
GGTCATTTAG GCTGGATAGA GCTGTTGCTG GTCAAGTATT ACGACCCTAT GTATCAATAT
CAAATCGATA AGAAAGCCGA ACGTATTTTA TTTAAAGGCG ACCATCAAGC TATGCATCAG
TGGCTAGATG ACCATTAA
 
Protein sequence
MTLNKVPASE YRRILVNDHP IMDARAPVEF EKGAFPASVN HPLMEDEERK KVGTCYKEHG 
QETAIKLGHS LVQGEIKQQR VDAWLDFFTK NPDGYLYCFR GGLRSQLTQQ WLKEAGLDIP
FIEGGYKAMR QFLIETIDNA ANVKPMLILS GITGSGKTDF LLQRKEAVDL EGIAHHRGSS
FGRYHEGQPS QINFENALAV ALLKHQDTDA KHLLLEDESF LIGRSALPQA FYSGMQTASV
LVLEESMDAR LTRLLNEYVH KMHSGYIQRL GEEAGFEAFA QYLAQSITGI KKRLGGKQHD
ELQAMITDAL SIQTSQNDTR GHLGWIELLL VKYYDPMYQY QIDKKAERIL FKGDHQAMHQ
WLDDH