Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0160 |
Symbol | |
ID | 5660561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 174763 |
End bp | 175860 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641234673 |
Product | tRNA 2-selenouridine synthase |
Protein accession | YP_001500024 |
Protein GI | 157959990 |
COG category | [R] General function prediction only |
COG ID | [COG2603] Predicted ATPase |
TIGRFAM ID | [TIGR03167] tRNA 2-selenouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.334237 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACTCA ATAAAGTGCC CGCAAGCGAA TATCGCCGAA TACTCGTTAA CGATCATCCC ATAATGGATG CGCGCGCACC GGTAGAGTTT GAGAAAGGTG CCTTTCCTGC CAGCGTTAAC CACCCCCTAA TGGAGGATGA GGAGCGTAAA AAGGTGGGTA CTTGCTATAA AGAACATGGC CAAGAGACCG CGATCAAGCT AGGCCATTCA CTGGTTCAAG GTGAAATCAA GCAACAAAGA GTCGATGCTT GGCTAGATTT TTTCACTAAG AATCCAGATG GATATCTTTA TTGTTTTCGT GGTGGCCTAC GTTCACAACT GACCCAGCAA TGGCTAAAAG AAGCAGGCCT AGATATCCCC TTTATTGAAG GCGGCTATAA GGCCATGCGC CAGTTTCTGA TTGAAACCAT AGATAATGCA GCCAATGTAA AGCCGATGCT TATCCTAAGC GGAATAACTG GCAGTGGTAA AACTGACTTC CTTTTGCAGC GTAAAGAAGC CGTTGATCTT GAAGGAATAG CGCACCACAG AGGTTCCAGC TTTGGTCGCT ATCACGAAGG GCAACCGAGC CAAATCAACT TTGAAAATGC CCTCGCTGTT GCACTGTTAA AGCATCAAGA CACTGATGCA AAGCACTTGC TACTCGAAGA TGAAAGCTTC CTGATTGGTC GTTCTGCATT ACCCCAGGCT TTCTATTCAG GCATGCAGAC AGCCAGCGTA TTGGTGTTAG AAGAGTCGAT GGATGCAAGA CTGACGCGCC TACTTAACGA ATATGTGCAC AAGATGCATA GTGGTTATAT CCAAAGGCTA GGTGAAGAAG CAGGCTTCGA AGCTTTTGCC CAATACTTGG CCCAAAGCAT CACAGGCATT AAAAAGCGCC TAGGTGGAAA ACAACATGAC GAGCTTCAGG CAATGATCAC TGATGCCTTA AGTATTCAAA CGAGTCAAAA TGACACCCGT GGTCATTTAG GCTGGATAGA GCTGTTGCTG GTCAAGTATT ACGACCCTAT GTATCAATAT CAAATCGATA AGAAAGCCGA ACGTATTTTA TTTAAAGGCG ACCATCAAGC TATGCATCAG TGGCTAGATG ACCATTAA
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Protein sequence | MTLNKVPASE YRRILVNDHP IMDARAPVEF EKGAFPASVN HPLMEDEERK KVGTCYKEHG QETAIKLGHS LVQGEIKQQR VDAWLDFFTK NPDGYLYCFR GGLRSQLTQQ WLKEAGLDIP FIEGGYKAMR QFLIETIDNA ANVKPMLILS GITGSGKTDF LLQRKEAVDL EGIAHHRGSS FGRYHEGQPS QINFENALAV ALLKHQDTDA KHLLLEDESF LIGRSALPQA FYSGMQTASV LVLEESMDAR LTRLLNEYVH KMHSGYIQRL GEEAGFEAFA QYLAQSITGI KKRLGGKQHD ELQAMITDAL SIQTSQNDTR GHLGWIELLL VKYYDPMYQY QIDKKAERIL FKGDHQAMHQ WLDDH
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