| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0159 |
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| Symbol | |
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| ID | 5660560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 173066 |
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| End bp | 174748 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641234672 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001500023 |
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| Protein GI | 157959989 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.591852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTATTTA GCCGGCGTTT CTTACCCTAT TTTGTGACTC TATGCCTTGG TGCACTGAAC
GACAATGTAT TTAAAAATGT ACTGCTGCTG TTAGTGACCT ATTCACAGGT TGAGCTGCTA
CCGATCGATA TTAACCTCTT TGTTAATCTG GCCGCAGGCC TATTTATTCT GCCTTTTTTG
CTGTTTTCAG CTCACGCGGG GCAGGTGGCG GACAGTGTTG ATAAAGCGCT GCTAATTCGA
ATACTTAAGC TACTCGAACT CATCATCATG TCGGTGGCCA TTTTCGCAAT TATGAGTAAT
AGCTATCTGG TTATGCTGCT ATTACTGTTT CTTACTGGGG TGCAGTCCGC GTATTTTGGT
CCGGTAAAAT ACTCACTATT ACCAAGAGTG CTACACGAAA GCGAACTCGT CTCGGGTAAT
GCCTGGGTTG AGATGGGCAC CTTCTTAGCC ATTCTGATTG GAACAATTTC GGCAGGAATG
ATTGTTGCCA GTGACATGGC GACATACTGG GCTGCAGCCA CGGTATTTAT CCTAGCTTTA
ATTGGTATGG CTGCGAGTTG GTTTATCCCG AGTATTCCAG CCCACTCCGA TGTTAAACCT
CGATTTTCTA TTATCTCTGC CACCATGGAT AACCTTAACA AGGCGCGTAA CAACAAGGCC
ATTTGGACTG CTATTTTAGC TATCAGTTGG TTTTGGTTTG TGGGGGCGAC TTATCTTACT
CAGTTCCCTA ATTTTGCTCG AATAACCTTA AATGCCGACC CGACGGTGGT ATCACTACTC
CTATTGCTGT TTTCGGTGGG CATTGGTGCT GGTTCATTTT TTTGTGAGCG GCTTTCTTGT
CGGCGGGTTG AGCTTGGGAT TATGCCTTTA GGCTTGCTGT TACTCGCTTG CTTCGGAATC
GATCTCTATT TTGCTATACC CAATAAAACG ACATTAGTTG GGCTTTATCA ATTAGATAGC
TTTATTGCAG AGTCTGGGCA TTATCGTCTG ATGTTTGATC TGTTTATGAT TGGCGTCGGA
GGTGGCTTAT TTATCGTGCC GCTTTATACC TTTATTCAGG TGCGAGCCAA AGAGGGCGAG
TGCGCACAGG CGATTGCGAG TAACAATATC CTCAATGCAT TATTTATGGT GAGTTCGGCT
ATATTTGCCA TGCTGGCCTT GAATGTATTG CAGTGGCCGA TAGAGTTGCT CTTTTTGGTC
TTAGCTGTGG TAAATATCTT GGTGCTACTG TATTTATTTT GGCGCTGGCC AGAACTCTTA
CTCAGCTGCG AGAGTTACTT TTATCGCAGG GTTTTACATA AAACCCAAGT GCTAGATCTA
GAGTCTTTGC ATAAATCGTC TAAATTATTG CTGGTTACCG AGCAAGCATC TTGGCGAGAG
TTAATGGTGA TATTTGGCAG CTTTAACCAT CCGATTTTGT TTGCAAACTT AAATCAGCAG
ACTTGGCCTA ATCGCTTTAT TGGGTACGCA TTATCTCGAT TGAGTTGGTA TCCGCATCAA
CAAATGGAAG TCGATAGCGT TGTTTGCGTG AATAAGGCCT CACTTGGTGA GTTTAAAGCC
CGCGCCGAAT TTGCAGACTT CACTGTTGTG TCAGTTAAAT TTACTGCTAT TGAGGGAAGA
GTACTGAAGT TAGAAATAAC CCCATTAGCT GCCGGTAACA GCGAGCTAAT GGGATGGGCT
TAG
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| Protein sequence | MLFSRRFLPY FVTLCLGALN DNVFKNVLLL LVTYSQVELL PIDINLFVNL AAGLFILPFL
LFSAHAGQVA DSVDKALLIR ILKLLELIIM SVAIFAIMSN SYLVMLLLLF LTGVQSAYFG
PVKYSLLPRV LHESELVSGN AWVEMGTFLA ILIGTISAGM IVASDMATYW AAATVFILAL
IGMAASWFIP SIPAHSDVKP RFSIISATMD NLNKARNNKA IWTAILAISW FWFVGATYLT
QFPNFARITL NADPTVVSLL LLLFSVGIGA GSFFCERLSC RRVELGIMPL GLLLLACFGI
DLYFAIPNKT TLVGLYQLDS FIAESGHYRL MFDLFMIGVG GGLFIVPLYT FIQVRAKEGE
CAQAIASNNI LNALFMVSSA IFAMLALNVL QWPIELLFLV LAVVNILVLL YLFWRWPELL
LSCESYFYRR VLHKTQVLDL ESLHKSSKLL LVTEQASWRE LMVIFGSFNH PILFANLNQQ
TWPNRFIGYA LSRLSWYPHQ QMEVDSVVCV NKASLGEFKA RAEFADFTVV SVKFTAIEGR
VLKLEITPLA AGNSELMGWA
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