Gene Spea_0156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0156 
SymbolnudE 
ID5660557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp171198 
End bp171752 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content45% 
IMG OID641234669 
ProductADP-ribose diphosphatase NudE 
Protein accessionYP_001500020 
Protein GI157959986 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00016487 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAAA AGAATGAGAA ACCGGAGATT TTGCACACTG AAATAGTGGC AACCAGTCGG 
CTGTTTCAGA TTGAGCAGGT GCACTTGAGG TTTTCTAATC AAGTCGAGCG TCAGTATGAG 
CGAATGAAAG GTAATAATCG TGGCGCTGTC ATGGTTGTGC CGGTGCTCAA TGGCACCGAG 
CTTTTATTGG GTAGAGAGTA TGCTGCTGGT ACTCACAGCT ATGAGTTAGG ATTCCCCAAG 
GGCTTGATAG ATCCTGGTGA AGAAGCCCAT GAAGCGGCTA ACCGAGAGTT ACAAGAGGAA 
ATTGGCTTTG GTGCCAGAAA GCTAACTCAT TTGATGGAAT TGAGCTTAGC ACCGGGTTAT 
TTCGCCAGTA AGATGCAAAT CTTTTTAGCT GAAGATCTAT ATGAGAGTCG ACTAGAAGGC 
GATGAACCTG AGCCGATCGA TATGGTTACC TGGCCGTTGG TAACATGGCA AGAGCTGTTG 
TCGGAGGAAG ATTTTTCTGA GTCTCGCAGT GTAAGCGCTT TATTTTTAGC TCAGAAACAT 
CTACAACTTA GATAG
 
Protein sequence
MTKKNEKPEI LHTEIVATSR LFQIEQVHLR FSNQVERQYE RMKGNNRGAV MVVPVLNGTE 
LLLGREYAAG THSYELGFPK GLIDPGEEAH EAANRELQEE IGFGARKLTH LMELSLAPGY 
FASKMQIFLA EDLYESRLEG DEPEPIDMVT WPLVTWQELL SEEDFSESRS VSALFLAQKH 
LQLR