| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0155 |
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| Symbol | |
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| ID | 5660556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 170442 |
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| End bp | 171110 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641234668 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001500019 |
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| Protein GI | 157959985 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0107208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTCCAT GGAATGAAAT TGACAGTGTT TTACTCGATA TGGACGGCAC CTTATTGGAT
CTGCATTTTG ACAATCATTT TTGGGTGCAG CTGATCCCAA AGGAACTGAG TCAACAGCGC
GGTATATCAG AAAAAGAAGC CAGCGAATGG GTTGAGCAGT GCTATGCCGA TGTAGAAGGT
ACATTAAATT GGTACTGCCT CGATTATTGG CAGCAGCAGA TGGGACTAGA TATTATGTCG
CTACACCGAA CTCTGGTGGA TAGGATTCAG TTACGCCAAG ACAGCATGCC CTTTCTTAAC
GCGCTACAGA GCGCTGGAAA GTCTCGCATC TTAGTCACTA ACGCTCACCC TAAAAATCTG
ATGCTGAAGC TGGAACACAC AGACTTAGGC TTAGGCCTAG ATGAAATAAT CTCGAGCCAT
GAAACCGGTT ACCCGAAAGA GCATCCAGAG TTTTGGCTGC AGCTATTTGA ACGTTTCAAC
CTTGACCCTA GTCGCTGCCT GTTTATCGAT GATAATGAAG CCATTTTACA AGCGGCAAAA
TTAGCTGGGG TGGGTTATCA GTTAGGAATT GCTAACCCTG ATAGCCAAAA GCCCAATAAA
GTGTTCGATG ACTTCCCAGC CATTGAAGAT TACCACTACC TACTAAAAGA GCTCATTAAG
CAACCGTAG
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| Protein sequence | MFPWNEIDSV LLDMDGTLLD LHFDNHFWVQ LIPKELSQQR GISEKEASEW VEQCYADVEG
TLNWYCLDYW QQQMGLDIMS LHRTLVDRIQ LRQDSMPFLN ALQSAGKSRI LVTNAHPKNL
MLKLEHTDLG LGLDEIISSH ETGYPKEHPE FWLQLFERFN LDPSRCLFID DNEAILQAAK
LAGVGYQLGI ANPDSQKPNK VFDDFPAIED YHYLLKELIK QP
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