Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0154 |
Symbol | |
ID | 5660555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 169593 |
End bp | 170351 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641234667 |
Product | type II secretion system protein N |
Protein accession | YP_001500018 |
Protein GI | 157959984 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0265405 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAATTAG CAAAGATGAT TGCGTTAGGC TTTTTAGTCT ACTTGGTATT TTTAGTGGTG CAGTTTCCGG CCAATTTCGC AGTTAAGCTG GCGCCTTTAC CAAACAATGT CGCCATTAGT GGTGTGTCAG GCACGATTTG GGCGGGTAAG ATCGATATGC TCAGCGTGCA AAAGCGCCAA GTGGAAATGA TAACTTGGGA TTTGAATGTC TGGTCTTTAT TGACTGGCAC AGTTAAGGCC GATGTGGTGA TCGGTAATCG GGCTAGTGCG GTAAACGGTA AAGGAACTGT CGCTTATTCG TTTAGTGGAT TAGACGTTTC AGGCTTAAGG TTTGAAGCGC CGAGCAGCTT CTTATTAGGG CGCACTAACT TACCCTTTAG AACCAAAGTT AATGGTGACT TAAGCGTGTT GGTAGATAAC TTTGAGCAGG GCATGCCTTG GTGTGAACAG TTATCTGGTA AGTTATTTTT GAATCAAGTG AATGTTACTA ACCAGTTTGG TAAGTACCCA CTTGGCGATA TTGCGCTTGG ACTCGCCTGT CTTGATGGCA AAGTTGAATT GACCACAGAC GAAAAGCTTA ATGGACTTGG CCTCGATGGC AATATCGTAT TAGCCGATAA CAAGATGATA CAGGTGAACG CCAAGATCCG TGAAGTGAAC ACTCAGCCAG ATGACTTGAA GAAGGCGTTA TCATTCTTAG GTAAGAAAGA TAGCCAAGGT TATTACCCGA TAACCTATCA AGGACGTTTA CCTATCTAG
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Protein sequence | MKLAKMIALG FLVYLVFLVV QFPANFAVKL APLPNNVAIS GVSGTIWAGK IDMLSVQKRQ VEMITWDLNV WSLLTGTVKA DVVIGNRASA VNGKGTVAYS FSGLDVSGLR FEAPSSFLLG RTNLPFRTKV NGDLSVLVDN FEQGMPWCEQ LSGKLFLNQV NVTNQFGKYP LGDIALGLAC LDGKVELTTD EKLNGLGLDG NIVLADNKMI QVNAKIREVN TQPDDLKKAL SFLGKKDSQG YYPITYQGRL PI
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