Gene Spea_0154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0154 
Symbol 
ID5660555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp169593 
End bp170351 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content44% 
IMG OID641234667 
Producttype II secretion system protein N 
Protein accessionYP_001500018 
Protein GI157959984 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0265405 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAATTAG CAAAGATGAT TGCGTTAGGC TTTTTAGTCT ACTTGGTATT TTTAGTGGTG 
CAGTTTCCGG CCAATTTCGC AGTTAAGCTG GCGCCTTTAC CAAACAATGT CGCCATTAGT
GGTGTGTCAG GCACGATTTG GGCGGGTAAG ATCGATATGC TCAGCGTGCA AAAGCGCCAA
GTGGAAATGA TAACTTGGGA TTTGAATGTC TGGTCTTTAT TGACTGGCAC AGTTAAGGCC
GATGTGGTGA TCGGTAATCG GGCTAGTGCG GTAAACGGTA AAGGAACTGT CGCTTATTCG
TTTAGTGGAT TAGACGTTTC AGGCTTAAGG TTTGAAGCGC CGAGCAGCTT CTTATTAGGG
CGCACTAACT TACCCTTTAG AACCAAAGTT AATGGTGACT TAAGCGTGTT GGTAGATAAC
TTTGAGCAGG GCATGCCTTG GTGTGAACAG TTATCTGGTA AGTTATTTTT GAATCAAGTG
AATGTTACTA ACCAGTTTGG TAAGTACCCA CTTGGCGATA TTGCGCTTGG ACTCGCCTGT
CTTGATGGCA AAGTTGAATT GACCACAGAC GAAAAGCTTA ATGGACTTGG CCTCGATGGC
AATATCGTAT TAGCCGATAA CAAGATGATA CAGGTGAACG CCAAGATCCG TGAAGTGAAC
ACTCAGCCAG ATGACTTGAA GAAGGCGTTA TCATTCTTAG GTAAGAAAGA TAGCCAAGGT
TATTACCCGA TAACCTATCA AGGACGTTTA CCTATCTAG
 
Protein sequence
MKLAKMIALG FLVYLVFLVV QFPANFAVKL APLPNNVAIS GVSGTIWAGK IDMLSVQKRQ 
VEMITWDLNV WSLLTGTVKA DVVIGNRASA VNGKGTVAYS FSGLDVSGLR FEAPSSFLLG
RTNLPFRTKV NGDLSVLVDN FEQGMPWCEQ LSGKLFLNQV NVTNQFGKYP LGDIALGLAC
LDGKVELTTD EKLNGLGLDG NIVLADNKMI QVNAKIREVN TQPDDLKKAL SFLGKKDSQG
YYPITYQGRL PI