| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0148 |
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| Symbol | |
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| ID | 5660549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 165175 |
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| End bp | 165807 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641234661 |
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| Product | general secretion pathway protein H |
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| Protein accession | YP_001500012 |
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| Protein GI | 157959978 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR01708] general secretion pathway protein H
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATATCGG AAACTGGAAC CTACAGAATT TCCAATAATA TGAGCTTGCT GCGATTGAAC
TTAGCACGCC AAACGGGCTT CACCTTAATG GAGGTGTTGC TCGTTGTTTT GCTTATGGGC
TTGGCCGCAA CTGCTGTCAC CCTTGGCATG GGCGGGGCGA GTAAAGAAAA GGCGCTAGAA
CGCACCGCGC AGCAGTTCAT GATGTCTACC GAAATGGTGC TAGATGAAAC GGTTCTAAGC
GGCCATTTCG TGGGCATAGT GATCGAAGAC AATAGCTATA AATACGTTTA TTACGATGAG
GGTAAGTGGA AGCCTTTAGA GCAAGATAGA TTGCTCGCTG AGCGTCAGAT GGAACCTGGT
GTTGAGATGG TGCTGGTGCT CGATGGTTTA CCTTTAGTTC AAGATGACGA AGAACAAGAT
TCTTGGTTTG ATGAGCCCCT TATTGAAAAA TCCGCCGACG AAAAGAAGAA GTTTCCTGAG
CCGCAGATCA TGTTATTCCC GAGTGGTGAG ATGAGTGCGT TTGAGCTGTC TTTCGTTAGC
GAAGATGAAA CGAAGCAAGA TATCGAAGTT GTGGTATTCG GTGATGCCTT GGGTCGCTTA
CGTATGGGTT TCGAAGATGA AGAAGTCTTA TGA
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| Protein sequence | MISETGTYRI SNNMSLLRLN LARQTGFTLM EVLLVVLLMG LAATAVTLGM GGASKEKALE
RTAQQFMMST EMVLDETVLS GHFVGIVIED NSYKYVYYDE GKWKPLEQDR LLAERQMEPG
VEMVLVLDGL PLVQDDEEQD SWFDEPLIEK SADEKKKFPE PQIMLFPSGE MSAFELSFVS
EDETKQDIEV VVFGDALGRL RMGFEDEEVL
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