Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0145 |
Symbol | |
ID | 5660546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 161916 |
End bp | 163487 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641234658 |
Product | general secretory pathway protein E |
Protein accession | YP_001500009 |
Protein GI | 157959975 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAGA ATTCAATTAT AGTCGATGAA GAGCTAGTGC AGGTCTCGAA TGAGCTTGGA CTAGTGTCTG AGGAAGAGGC GGATCAGCTT TTTCATTCGA ATAGCAAAGA GCGTTTGCCC TTTGCTTTTG CCCATAGATT TAAGGTGGCG CTTGCCGCCG ACGCTGACGG CGAGTTGTCG CTTTACCATA CTCAAGGTAC ACCATTGAGT GCATTGCTTG AGGTACGTCG CTACTGTGGT AAAGAATTGC CCTTGATAAC GTTAGAAGAC ACAGCTTTTG AGGCGCGTCT TACTCAAGCC TATCAAGCTA ACTCTTCTGA AGCGCAGCAG ATGATGGAAG ATATCGGTAA TGAAATGGAC CTGTTCACTC TTGCCGAAGA GTTGCCACAA ACAGAAGATC TACTCGAGGG TGACGATGAC GCACCGATTA TTAAGTTAAT CAATGCGCTA TTGTCTGAGG CTATTAAGGA AGAAGCGTCA GATATTCATA TCGAAACCTA CGAGAAACAG TTAATTGTGC GTTTCCGTGT CGATGGCATT CTCAAAGAAG TTCTCAAGCC TAATCGTAAA CTGTCATCTT TGTTGGTGTC ACGTATCAAG GTTATGGCAC GTCTCGATAT TGCTGAAAAA CGTGTACCAC AAGATGGTCG CATTTCGCTG CGTATCGCGG GACGAGCTGT GGATGTGCGT GTATCGACTA TGCCGTCAAG TCATGGCGAG CGTGTGGTGC TACGTCTACT CGATAAAAAT GCGGGTAACT TAGACCTAGA GCAGCTAGGT ATGACCGAAG CGGTTCGTCA TCAATTTGAT GACTTAATCC GCAGACCACA CGGTATTATT TTGGTGACCG GTCCAACCGG TTCGGGTAAG AGTACCACTC TCTATGCAGG CCTTACCGAA ATTAACTCGA AAGATACCAA CATTCTTACC GTCGAAGACC CAATAGAATA CGAACTCGAA GGTATTGGTC AGACTCAGGT AAACACTAAG GTCGATATGA CCTTCGCTCG TGGCCTACGT GCTATTTTGC GTCAAGATCC TGATGTGGTG ATGATTGGTG AGATCCGAGA TCTTGAGACT GCGCAAATTG CGGTTCAGGC ATCGTTAACT GGCCATATGG TTATCTCAAC CCTACATACT AATACGGCAT CGGGCGCGAT TACTCGTTTA CAAGATATGG GCGTAGAACC TTTCCTCGTG TCTTCCAGTT TACTTGGTGT CCTCGCTCAA CGTCTTATCC GTACCTTGTG CCCAAGCTGT AAAGAGTCGC ATACCCCGGA TAATCGTGAA AGAGAGCTTC TCGGTATTAC CGCTGACGAT CCTCGTGTTA TTTTCCGCGC GAAGGGTTGT CAGGCTTGTG GTCACAATGG TTATCGTGGC CGTACCGGTA TTCATGAGTT ACTCATAGTC GATGATCATG TGCGTGAACT TATTCACACC GGTCGCGGTG AATTAGCGAT TGAAAAGCAT ATTCGTCAAT CTGTTCCGAG CATTCGTCAC GACGGTATGA GTAAAGTGCT TGCGGGGAAA ACTACCCTAG AAGAAGTGCT GCGTGTCACT CGAGAGGAGT AA
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Protein sequence | MSENSIIVDE ELVQVSNELG LVSEEEADQL FHSNSKERLP FAFAHRFKVA LAADADGELS LYHTQGTPLS ALLEVRRYCG KELPLITLED TAFEARLTQA YQANSSEAQQ MMEDIGNEMD LFTLAEELPQ TEDLLEGDDD APIIKLINAL LSEAIKEEAS DIHIETYEKQ LIVRFRVDGI LKEVLKPNRK LSSLLVSRIK VMARLDIAEK RVPQDGRISL RIAGRAVDVR VSTMPSSHGE RVVLRLLDKN AGNLDLEQLG MTEAVRHQFD DLIRRPHGII LVTGPTGSGK STTLYAGLTE INSKDTNILT VEDPIEYELE GIGQTQVNTK VDMTFARGLR AILRQDPDVV MIGEIRDLET AQIAVQASLT GHMVISTLHT NTASGAITRL QDMGVEPFLV SSSLLGVLAQ RLIRTLCPSC KESHTPDNRE RELLGITADD PRVIFRAKGC QACGHNGYRG RTGIHELLIV DDHVRELIHT GRGELAIEKH IRQSVPSIRH DGMSKVLAGK TTLEEVLRVT REE
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