Gene Spea_0141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0141 
SymbolhslO 
ID5660542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp157228 
End bp158100 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content46% 
IMG OID641234654 
ProductHsp33-like chaperonin 
Protein accessionYP_001500005 
Protein GI157959971 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1281] Disulfide bond chaperones of the HSP33 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGAAC AGATGACTAA AGACAATCTA TATCGCTATT TATTCGAAAA CGCGAGTGTA 
CGTGGCGAAT TAGTACAGTT AGAAAATAGT TACCAAGAAG TATTATCAGC ACATGAATAC
CCATTGGCGA TCCAACACGT ATTGGGTGAG CTAATGGCTT CTACTGCTTT ATTAACGGCA
ACTTTGAAGT TTAGCGGTGA TATCAGCATT CAGCTGCAAG GCGATGGTCC GGTATCATTA
GCGGTAATCA ACGGTAATAA TCTGCAACAG CTTCGAGGCG TATCACGCTG GGACGGCGAA
ATTAGCGACG ATGCCAGCCT TACGCAGATG TTTGGTAAAG GCTATATGGT GATCACCCTA
ACTCCAGATG ACGGCGAACG TTATCAAGGC GTGGTAGCAC TAGATAAAGA CACCCTAGCG
GAATGTCTAG AAGATTATTT CGCCCAATCT GAACAGCTAC CAACCAAGAT CAAGCTGTTT
GCCGATACTA AGCAAGCCGC AGGCATGTTC TTGCAAGTGC TACCTACCGA TGGTAACCAC
AACCAAGAGT TCGAACACCT ATCTGTATTA ACTGCAACCG TTAAGCAGGA AGAGCTATTC
ACACTACCAG CGGAAGAAGT ACTGCACCGC TTATACCACG AAGAGGAAGT GCGCTTATTT
GATCCAGTGT CGATTAGTTT TAAGTGTACT TGCTCTAAAG AGCGCAGCGC ACAAGCTATC
CGCACTGTAT CGAAAGAAGA AGTCGATTCG ATTCTAGCCG AGCAAGGCAA GGTGGAGATG
GGCTGTGAGT ATTGCAACAG CAAATACATC TTCGACGCTA TCGATGTTGA AGCCATCTTC
GCCAACGCTC CGACTAGCGA TGTGACTCAA TAA
 
Protein sequence
MNEQMTKDNL YRYLFENASV RGELVQLENS YQEVLSAHEY PLAIQHVLGE LMASTALLTA 
TLKFSGDISI QLQGDGPVSL AVINGNNLQQ LRGVSRWDGE ISDDASLTQM FGKGYMVITL
TPDDGERYQG VVALDKDTLA ECLEDYFAQS EQLPTKIKLF ADTKQAAGMF LQVLPTDGNH
NQEFEHLSVL TATVKQEELF TLPAEEVLHR LYHEEEVRLF DPVSISFKCT CSKERSAQAI
RTVSKEEVDS ILAEQGKVEM GCEYCNSKYI FDAIDVEAIF ANAPTSDVTQ