Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0141 |
Symbol | hslO |
ID | 5660542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 157228 |
End bp | 158100 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641234654 |
Product | Hsp33-like chaperonin |
Protein accession | YP_001500005 |
Protein GI | 157959971 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1281] Disulfide bond chaperones of the HSP33 family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGAAC AGATGACTAA AGACAATCTA TATCGCTATT TATTCGAAAA CGCGAGTGTA CGTGGCGAAT TAGTACAGTT AGAAAATAGT TACCAAGAAG TATTATCAGC ACATGAATAC CCATTGGCGA TCCAACACGT ATTGGGTGAG CTAATGGCTT CTACTGCTTT ATTAACGGCA ACTTTGAAGT TTAGCGGTGA TATCAGCATT CAGCTGCAAG GCGATGGTCC GGTATCATTA GCGGTAATCA ACGGTAATAA TCTGCAACAG CTTCGAGGCG TATCACGCTG GGACGGCGAA ATTAGCGACG ATGCCAGCCT TACGCAGATG TTTGGTAAAG GCTATATGGT GATCACCCTA ACTCCAGATG ACGGCGAACG TTATCAAGGC GTGGTAGCAC TAGATAAAGA CACCCTAGCG GAATGTCTAG AAGATTATTT CGCCCAATCT GAACAGCTAC CAACCAAGAT CAAGCTGTTT GCCGATACTA AGCAAGCCGC AGGCATGTTC TTGCAAGTGC TACCTACCGA TGGTAACCAC AACCAAGAGT TCGAACACCT ATCTGTATTA ACTGCAACCG TTAAGCAGGA AGAGCTATTC ACACTACCAG CGGAAGAAGT ACTGCACCGC TTATACCACG AAGAGGAAGT GCGCTTATTT GATCCAGTGT CGATTAGTTT TAAGTGTACT TGCTCTAAAG AGCGCAGCGC ACAAGCTATC CGCACTGTAT CGAAAGAAGA AGTCGATTCG ATTCTAGCCG AGCAAGGCAA GGTGGAGATG GGCTGTGAGT ATTGCAACAG CAAATACATC TTCGACGCTA TCGATGTTGA AGCCATCTTC GCCAACGCTC CGACTAGCGA TGTGACTCAA TAA
|
Protein sequence | MNEQMTKDNL YRYLFENASV RGELVQLENS YQEVLSAHEY PLAIQHVLGE LMASTALLTA TLKFSGDISI QLQGDGPVSL AVINGNNLQQ LRGVSRWDGE ISDDASLTQM FGKGYMVITL TPDDGERYQG VVALDKDTLA ECLEDYFAQS EQLPTKIKLF ADTKQAAGMF LQVLPTDGNH NQEFEHLSVL TATVKQEELF TLPAEEVLHR LYHEEEVRLF DPVSISFKCT CSKERSAQAI RTVSKEEVDS ILAEQGKVEM GCEYCNSKYI FDAIDVEAIF ANAPTSDVTQ
|
| |