Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0137 |
Symbol | |
ID | 5660538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 152488 |
End bp | 154326 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641234650 |
Product | peptidase M14 carboxypeptidase A |
Protein accession | YP_001500001 |
Protein GI | 157959967 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2866] Predicted carboxypeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000376748 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCTTAA CTTCCCTATC GGCCATCGCC TTATTGGCGG CTAGCAGCAA CGGCCTCGCG ACCGAGCAAA CTGATACTGC AACCCCACAA CTCTCCAATA CTTATATTAA CGATCAGATC CTTCCACCAA TTATCCCGTG GCAGGGAAGT AGCGAATCGC TACTCCAAGC TCCTGATGCC CAATGGGCGA CGCCTTTTGA GCAAAACGGC CTTAAAACCA GTCCAAGCTA TGATGAGACC TTTGCCTGGT TAGATAAGCT AATCGCCCAG AGCGAAATGC TAAAGAAGGT CAGCATAGGC AAGAGTCCAC AAGGTCGCGA CATTTGGATG ATTGTCGCCT CAAAAGAGGG AGCGGAAGAC GCAAGCGCAC TAGCACGTAA TGGTAAACCG ACCCTACTCG TACAAGCGGG GATCCACTCT GGTGAAATTG ACGGCAAAGA TGCCGGTATG ATGCTACTAC GTGACATGGT ATTTAACGGC AAAGCCGGGT TGCTCGATAA CGCCAACTTA CTATTCGTGC CCATTTTTAG TGTCGATGGT CATGAGCGTT CAACTGAATA TAACCGCGTT AACCAACGTG GCCCGGTCAA TATGGGCTGG CGCACCACAG CGCAAAACCT CAATCTAAAC CGTGATTATG CCAAGGCTGA CACGCCAGAG ATGCAGCATA TGCTGCGAGC AATCAACATC TGGCAACCGG ATCTTTATAT CGATGTCCAT GTCACCGACG GCATCGACTA TCAATACGAT GTGACTTTTG GCTATAACTT AGCGCAAGGC CAAAGCCCCT CGATCTACAA CTGGTTAGAA AACAGCTATC GCCCAAGTAT CGAGTCAGCA TTGTCTGAAC AGGGACACAT ACCCGGCCCT TTAGTGTTCG CAATAGATAA CACCGACATC ACTAAGGGCA TGTCACTTTG GAATGCTAGC CCACGCTTCT CTAATGGCTA TGGCGACGCT CGCCACCTAC CGACTATCTT GATTGAAAAC CACAGCTTGA AGCCCTTTAA ACAGCGAGTA CTCGGCACCT ATGTGATGCT CGAATCCAGT CTTAAGGCCA TCGCTAACGA TAGCACTAAA TTACAATCTG CTATTCAGCA AGATAAGTAT CGTTACTCAC CTAGGGTGAC TCTGTCATGG CAACAGGAGC AGCAAGCTCA AGGCTGGGAT TTTAAAGGCA TAGGTTACAC GCTAGAGCAA AGCGCTATTA GTGGTAACGA TATTGTGCGC TGGAATGGCC TGCCACAGCT GTACCCGAAC TTGCCAGTAA TTGGTGGCAC CAAAGCCGAT ATAAAAGTAA GTCGCCCAGA TGCATATTAC ATTCCCCCAC AATGGCAAGA GGTTATTGAA CGCTTACGTG TGCATGGTAT CCGTATGACT AGGCTAGATA AACCTACAGA GCTTAAGTTA CAACAATATC AATTTTCAGA ACCAAGCTTT GCCAATCGCG ATTATGAAGG GCGTCAGCGG GTAAAGGCAG AGGTAAGTAG CCAAGCCATC GACCTACAAC TCCCCACAGG TACAGTACGC ATCGACACCA AACAACCTTT AGGTGACTTG GCCATATTGT TATTGGAACC GCAATCACCC GATTCGCTGT TCCAATGGGG TTTTTTCAAC CCTATCTTTA CTCGCACCGA GTACATTGAA AACTATGCAG TGGAGCCTTT AGCCGCTCAG ATGCTAGAAG ATGATCCGGC TCTGCAGACT GAGTTCAATA AGGCGCTTAA AGACCCAGAG TTTGCGGCGG ATCCCAAAGC ACGTTTACGC TGGTTCTATC AGCGTAGCCC CTACTACGAT AACCAATACT TAAAGTACCC AGTATTAAGA GGCTACTAA
|
Protein sequence | MRLTSLSAIA LLAASSNGLA TEQTDTATPQ LSNTYINDQI LPPIIPWQGS SESLLQAPDA QWATPFEQNG LKTSPSYDET FAWLDKLIAQ SEMLKKVSIG KSPQGRDIWM IVASKEGAED ASALARNGKP TLLVQAGIHS GEIDGKDAGM MLLRDMVFNG KAGLLDNANL LFVPIFSVDG HERSTEYNRV NQRGPVNMGW RTTAQNLNLN RDYAKADTPE MQHMLRAINI WQPDLYIDVH VTDGIDYQYD VTFGYNLAQG QSPSIYNWLE NSYRPSIESA LSEQGHIPGP LVFAIDNTDI TKGMSLWNAS PRFSNGYGDA RHLPTILIEN HSLKPFKQRV LGTYVMLESS LKAIANDSTK LQSAIQQDKY RYSPRVTLSW QQEQQAQGWD FKGIGYTLEQ SAISGNDIVR WNGLPQLYPN LPVIGGTKAD IKVSRPDAYY IPPQWQEVIE RLRVHGIRMT RLDKPTELKL QQYQFSEPSF ANRDYEGRQR VKAEVSSQAI DLQLPTGTVR IDTKQPLGDL AILLLEPQSP DSLFQWGFFN PIFTRTEYIE NYAVEPLAAQ MLEDDPALQT EFNKALKDPE FAADPKARLR WFYQRSPYYD NQYLKYPVLR GY
|
| |