Gene Spea_0131 details

Gene Information

• Locus tag: Spea_0131
• Symbol: ribB
• ID: 5660532
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: -
• Start bp: 145678
• End bp: 146316
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641234644
• Product: 3,4-dihydroxy-2-butanone 4-phosphate synthase
• Protein accession: YP_001499995
• Protein GI: 157959961
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
• TIGRFAM ID: [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCAGT CTTTACTTGC CCCTTATGGC AATCCAATCG AACGTGTTAA TGCAGCGCTT 
AGCGCACTTC GCCAAGGCAA AGGTGTGTTA GTGGTCGATG ATGAAGATCG TGAAAATGAA 
GGCGATCTGA TCTATTCAGC CGAAACGCTT ACCAACCAAC AGATGGCACT ACTCATTCGC 
GAATGCAGTG GTATTGTTTG TCTATGTCTA ACCGATGAAC GTATCAAGCA GTTACAACTT 
CCACCTATGG TGAGTGACAA CAATAGCCAA TATGGCACCG CCTTTACCGT TAGCATCGAA 
GCCAAACAAG GTGTCACCAC TGGTGTTTCG GCAGCCGATC GCGTGACGAC CATCAAGGCA 
GCTATCGCCG ATGATGCTAA GCCCGATGAT TTAGCCCGCC CAGGCCATGT GTACCCGCTG 
CGTGCTCGTC CAGGTGGCGT ATTAGAGCGT CGTGGCCATA CAGAAGGCAC GGTTGATCTG 
ATGAAACTCG CCGGATTACA GCCTTTTGGC GTGCTTTGTG AAGTCACTCT ACCCGACGGC 
ACCATGGCCC GCTTGCCTGA AATTGTCGAA TTTGCTCAGC AGCATGATAT GCCGGTACTG 
ACCATCGAAG ACATTGTTGC TTACCGTAAT ACTCAGTAA 

 

Protein sequence

MNQSLLAPYG NPIERVNAAL SALRQGKGVL VVDDEDRENE GDLIYSAETL TNQQMALLIR 
ECSGIVCLCL TDERIKQLQL PPMVSDNNSQ YGTAFTVSIE AKQGVTTGVS AADRVTTIKA 
AIADDAKPDD LARPGHVYPL RARPGGVLER RGHTEGTVDL MKLAGLQPFG VLCEVTLPDG 
TMARLPEIVE FAQQHDMPVL TIEDIVAYRN TQ