| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0110 |
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| Symbol | |
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| ID | 5660511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 123700 |
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| End bp | 124431 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641234623 |
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| Product | 3-deoxy-D-manno-octulosonic-acid kinase |
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| Protein accession | YP_001499974 |
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| Protein GI | 157959940 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0478] RIO-like serine/threonine protein kinase fused to N-terminal HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGTTTA AAAAAACTGC CAAAGGCAGT ATCGCTTATT GCCAATACAC ACCATCAAGT
ATCGAACCTA ACTGGTTTGC TGCCGACTTT TGGCGTCAGC AATCTGCCAT TACTGGTTCG
TCGAAGGGGC GTTACACCAC CTGGTTCGTC GATGCTAACA GCGTTGGCAA AGCTCAAAAC
CAGTGGGTAC TTCGTCACTA CTATCGTGGT GGTTTGATAG AAAAAATTAG CCGTGACCAA
TATCTGTTTA CCGGTTTAGA AAAAACCCGT GCGGTAGCTG AACTAGCGCT GCTAGAAAAC
CTTTACCAGC AAGGCTTTGC CGTACCTAAG CCGATCGCCG CCAATGTTGA GCGCTCAGGT
CTGTTCTATC GTGCCGACTT AATTATAGAG CGGGTAGAAG GTGCCGAAGA CTTAGTCGCC
AGATTAAGCA AAGCCGCTAT GACGGATGCG CAGTGGCTGG TTCTCGGTGA AACCATTGCC
GAATTTCACA ATCACGGCGT TTACCACGCG GACCTCAACG CTAAGAATAT CCTTATCTGT
GATGACAAGT TTTATCTGAT TGATTTTGAC CGTGGTGAGC TAAGAAAGCC CAACAGTCAA
TGGCAGCAAG CCAACATGAG TCGTTTGTTG CGCTCCTTTA GAAAGGAGCT GGGTAAATTG
CCAACGCTGG CGTTTAATGA TGGCAATTGG CAGCAACTGC ATCAAGGCTA TCTAGCCAAG
CTCAATCATT AG
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| Protein sequence | MKFKKTAKGS IAYCQYTPSS IEPNWFAADF WRQQSAITGS SKGRYTTWFV DANSVGKAQN
QWVLRHYYRG GLIEKISRDQ YLFTGLEKTR AVAELALLEN LYQQGFAVPK PIAANVERSG
LFYRADLIIE RVEGAEDLVA RLSKAAMTDA QWLVLGETIA EFHNHGVYHA DLNAKNILIC
DDKFYLIDFD RGELRKPNSQ WQQANMSRLL RSFRKELGKL PTLAFNDGNW QQLHQGYLAK
LNH
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