Gene Spea_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0108 
Symbol 
ID5660509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp121550 
End bp122191 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content42% 
IMG OID641234621 
ProductTetR family transcriptional regulator 
Protein accessionYP_001499972 
Protein GI157959938 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACCC GTGACAAAAT CGTACAAGCC AGTTTAGAGC TTTTTAATGA ACATGGCGAA 
AGAACAATCA CAACCAATCA TATCGCCGCC CACCTAAATA TTAGCCCTGG TAACCTCTAC 
TACCACTTTC GCAATAAAGA AGACATCATA CGTTCGATTT TTGGTCTTTA TGAGCAACAT 
CTCGAGTCTG GTTTTCAGCC TTATGTCGAT AAAGAGGTCG ATGTCGATCT ATTAGTCGGC 
TATTTCGATG CGATGTTTTA TACCCTTTGG CAATTCCGCT TTATGTACGC CAATCTCGCC 
GATATTCTCA GCCGCGATGA AACGCTAAAA AACCGCTACC TTAAGGCTCA GCAAGATGTG 
CTCGAACGCT CAAGCGGCGT ACTAGAAAAA TTAACTCAAG ATGGCTTCTT AGCGATTAAT 
TCTGAAGATA TTAAGCCTCT AGCCGACACC ATAAAGATGC TAGTCAGCTT TTGGATCAGC 
TATAAGCTCA CCCAAACTCA GTCAAACATC GGCTCAATCA CCAAAGAGTC ACTATATGAA 
GGCTTATTGC GGGTGATTAT GCTATTTAAA TCCTATGCGA CACCAAGCTC ACAGGCGACT 
TTTTTAAGAC TAGAAGAGCA CTACCGCTCA CAAATGCAAT AA
 
Protein sequence
MKTRDKIVQA SLELFNEHGE RTITTNHIAA HLNISPGNLY YHFRNKEDII RSIFGLYEQH 
LESGFQPYVD KEVDVDLLVG YFDAMFYTLW QFRFMYANLA DILSRDETLK NRYLKAQQDV 
LERSSGVLEK LTQDGFLAIN SEDIKPLADT IKMLVSFWIS YKLTQTQSNI GSITKESLYE 
GLLRVIMLFK SYATPSSQAT FLRLEEHYRS QMQ