Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0091 |
Symbol | |
ID | 5660492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 99901 |
End bp | 100680 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641234604 |
Product | flagellar biosynthetic protein FliR |
Protein accession | YP_001499955 |
Protein GI | 157959921 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGTCTC TTACCTCTAC CGAACTGAGT ACTTTTATTG GCACCTTTTG GTGGCCATTT TGCCGAATTA TGGGGGCCTT TATGGTCATG CCATTTTTAA GCAGCACCTA TATCCCAGTT ACGGTACGAA TTTTACTCGC ATTAACATTA TCGGCGCTGA TAGCACCGAT GTTACCACCA TTACCAGAAG TTGATGCAAT CTCGATACAG GCACTTTTAC TCGCCATTGA GCAGCTGCTG GTAGGGTTTA TGATGGCGCT ATTTCTCACC ATTATGCTCT ATGTCATGAC GCAGCTAGGT GAGATGCTAT CTATGCAGAT GGGTCTGGCG ATGGCGGTGA TGAACGACCC CTCTAGTGGT GGCTCACACC CTATTCTTGG TCAATGGTTC CTGCTCTATG GCACCTTGGT ATTCTTAGTG CTTGATGGGC ACTTAGTGGC GATTGGTGTG CTGGTCGATA GCTTTAGATT ATGGCCTGTG GGTATGGGCG TGTTTGACCT ACCGCTAATG GGGCTAATCG GTCGTATTAG CTGGCTATTT GCTGTTTCGT TTATGCTTGC TATCCCTTCT ATCCTTGCCA TGTTAATGGT CAACATTACC TTCGGTGTCT TGAGCCGTTC GGCGCCATCA CTAAACGTTT TTGCTCTGGG CTTCCCGATG TCAATGTTGA TGGGGTTGCT ATGTGTTTTC TTTTCATTCA GTGGCTTACC CAGTCGCTAT AGTGATCTCT GTTTAGACGC CTTGTCTGCC ATGTATCAGT TTATTGGGGG GATAACATGA
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Protein sequence | MLSLTSTELS TFIGTFWWPF CRIMGAFMVM PFLSSTYIPV TVRILLALTL SALIAPMLPP LPEVDAISIQ ALLLAIEQLL VGFMMALFLT IMLYVMTQLG EMLSMQMGLA MAVMNDPSSG GSHPILGQWF LLYGTLVFLV LDGHLVAIGV LVDSFRLWPV GMGVFDLPLM GLIGRISWLF AVSFMLAIPS ILAMLMVNIT FGVLSRSAPS LNVFALGFPM SMLMGLLCVF FSFSGLPSRY SDLCLDALSA MYQFIGGIT
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