Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0087 |
Symbol | |
ID | 5660488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 97405 |
End bp | 98286 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641234600 |
Product | hypothetical protein |
Protein accession | YP_001499951 |
Protein GI | 157959917 |
COG category | [N] Cell motility |
COG ID | [COG1868] Flagellar motor switch protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAA CTGCTAAAGC CAATCTAATT AAATCTAATC AGGGAATAGA AGTTAGACCT GTTGCCTTGA TCAAAGAGAA GTTAGCGAGA AGCCGATTGT TGGCGCAATT AGATCAATGT CTGCGTCCAA TAATGGATGC CGTCAATGAA TTACTACACC CAATTATTCG TCAAGGGCAT CATGGGCTAT CACAAGTTTC GTTAACCACT AAAACAAGTT CGTATGTACC CGAGTTGCAT CATGCTTGGT TCTTATTAAG CTACAATCGA ATCGCACTTG GCTGGTGGCG AATAGATAAG TGTACTTTAG ACCAGTTAGC GAGTGGCTAT TATGGTGCTT TTGCTAGCAC GCCGAAATCT CCATTAAGAT CGCCTAGTCA ATCTGAGTTT CGCTTGGTCA AGCGCCTTAT GATTGCGGCA ATTAAACGCT TACCTATTAC TGAGATCGAT GAGGATGCCC TTGAGCTGGA ACTCCTCAGC AATGAAACCC CAATAAAGGC ACCTGTCTGT TGTGAGCTCA GCTTTCCTGC TGCCCACAGT GGCCCGCCGA TGTTATTTTT TATGAGCGAG TACTTGCTGG GACTGATGGC CGAGTTACCG AGCCAGTATC AAGCCGATCC TGCCTTATCG GAAAAGCTCG CACACAGACT TAGACAGATC CCATTAAGAG TGTTACTCGA GCTTGGGCAC CAAAGTACAT CTTTGACTTC GCTACAAAAT TTAGCAGTGG GTGATGTTTT ACCAATGAAC TTGCACTCGC GCTGCCCGGT TACCGTCGGT AAACGTCCAC TTTTTTATGC CACGGTTCAT ACCCATGAGG GGCAAATGGT GGCGAAACTG ACCCAAGAAG CTTTTTACAT GGAGGAGCAA TCCAATGGCT GA
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Protein sequence | MKTTAKANLI KSNQGIEVRP VALIKEKLAR SRLLAQLDQC LRPIMDAVNE LLHPIIRQGH HGLSQVSLTT KTSSYVPELH HAWFLLSYNR IALGWWRIDK CTLDQLASGY YGAFASTPKS PLRSPSQSEF RLVKRLMIAA IKRLPITEID EDALELELLS NETPIKAPVC CELSFPAAHS GPPMLFFMSE YLLGLMAELP SQYQADPALS EKLAHRLRQI PLRVLLELGH QSTSLTSLQN LAVGDVLPMN LHSRCPVTVG KRPLFYATVH THEGQMVAKL TQEAFYMEEQ SNG
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