| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0076 |
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| Symbol | |
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| ID | 5660477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 87320 |
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| End bp | 88084 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641234589 |
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| Product | SAF domain-containing protein |
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| Protein accession | YP_001499940 |
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| Protein GI | 157959906 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1261] Flagellar basal body P-ring biosynthesis protein |
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| TIGRFAM ID | [TIGR03170] flagella basal body P-ring formation protein FlgA |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTTAATC TCTATTTATC AAGTAATTAC ACTGTATTTG CATCATTTGC AGGAACTATA
ACTTCCTGTG CCTTGCTTAT ATTTTCCTGT TTGTTTCCGC ATATTGTCGT GGCACAAGAA
GCCACTGGGG CCAGCACACA ACTTGAGCAA GAAATGACTC AGTTGATTAC TCGTGAAATC
AATCAGTGGC AAAAGCTGAT GGGGATAGCG CAGTTAACTG CAAAAATTAA AGTCAGAGTA
CCTTCGGGGG CTAAGCGGCT AGATGTTTGT CAATCGGGCT TAAGCATAGA AGCTGGCGCT
ATCCCTTTAG GCAATGTGCA GCGTAAGGTG AATTGTGCGT CCCAAGGCTG GAGTTTGTAC
GTTCGAGCGA CAGTAGAGGT CAGGGCTAAA GTGCCCGTTG CCAATCGTCT ATTAAGGCGT
GGAGAACATA TTTCGCTTGC CGATATCGAG TGGCAAGAGG TCAATCTAGA TGCATCTGAT
CGAAACTTAG TGGGGCAGTT AGATCAAATC GTTGGCCGAC AGGTGGTGAG AAAATTGCGT
CGACATCAGG CGATTAAATC GCAGCAACTG GATGATCCAC AATGGGTTAA TATTGGTGAC
CGAGTCATTA TCGAGGCGCG TAGCAATGGC TTTTATGCCA ATATGCCAGG TGAAGCACTC
GAAGGTGGCG GGCAGGGGCA AGCCATTAGG GTAAGAAACT TAAGCTCAGG CAAAGTCATT
TCGGCCTATC CTATCGCGAA GGGGCGAGTG GCCACTCAAT TTTAA
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| Protein sequence | MLNLYLSSNY TVFASFAGTI TSCALLIFSC LFPHIVVAQE ATGASTQLEQ EMTQLITREI
NQWQKLMGIA QLTAKIKVRV PSGAKRLDVC QSGLSIEAGA IPLGNVQRKV NCASQGWSLY
VRATVEVRAK VPVANRLLRR GEHISLADIE WQEVNLDASD RNLVGQLDQI VGRQVVRKLR
RHQAIKSQQL DDPQWVNIGD RVIIEARSNG FYANMPGEAL EGGGQGQAIR VRNLSSGKVI
SAYPIAKGRV ATQF
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