Gene Spea_0074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0074 
Symbol 
ID5660475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp86478 
End bp86897 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content50% 
IMG OID641234587 
Productflagellar basal-body rod protein FlgC 
Protein accessionYP_001499938 
Protein GI157959904 
COG category[N] Cell motility 
COG ID[COG1558] Flagellar basal body rod protein 
TIGRFAM ID[TIGR01395] flagellar basal-body rod protein FlgC 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATTCG CAGAAATCTA TCAAATTGCC GGTGCAGGCA TGAACGCGCA AACGATTCGC 
CTCAATACCG TTGCCAGTAA CCTTGCCAAT GCTGGCGCAG CAGCCGAAAG CCCAGATCAA
GCATTTCGCG CGTTAAAGCC TGTGTTCTCC ACCATCTACA AGCAAACCCA AGAGGGAGAA
CTTGCAGGAG CACACGTCGA AGTGTCGGCC ATAGTACAAA GCGATGCGCC GCTCGATCTA
CGTTACGAAC CAAACCATCC CTTTGCCGAT GAGCAAGGCT ATGTCGCCTA CTCAAACGTT
AATACCGTAG AAGAGATGGC CGACATGATG GCGGCTAGCC GCTCTTTTGA AACCAGCGTT
GAAGTAATGA ATCGCGCTCG CTCAATGCAG CAAGGTTTAT TACAACTAGG AACCAAATAA
 
Protein sequence
MSFAEIYQIA GAGMNAQTIR LNTVASNLAN AGAAAESPDQ AFRALKPVFS TIYKQTQEGE 
LAGAHVEVSA IVQSDAPLDL RYEPNHPFAD EQGYVAYSNV NTVEEMADMM AASRSFETSV
EVMNRARSMQ QGLLQLGTK