Gene Spea_0066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0066 
Symbol 
ID5660467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp79297 
End bp80670 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content46% 
IMG OID641234579 
Productflagellar hook-associated protein FlgK 
Protein accessionYP_001499930 
Protein GI157959896 
COG category[N] Cell motility 
COG ID[COG1256] Flagellar hook-associated protein 
TIGRFAM ID[TIGR02492] flagellar hook-associated protein FlgK 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATGC TCAATATTGG TATGTCAGGG CTTAATGCCA GTATGGCGGC CCTAACTGCG 
ACCTCAAATA ATGTCTCCAA CGCCATGGTG CCGGGGTACT CTCGCCAACA AGTGGTAATG
AGTTCGGTAG GTAATGGCAC ATATGGCAGT GGCTCAGGCG TGATGGTAGA TGGTGTGCGC
CGAATCTCCG ATCAATACCA AGTCACACAG CAGTGGAATG CCACTAGCAA CTTAGGTTTT
GCTGAAACAC AAGCCAGTTA TTTTGGTCAG GTTGAGCAAA TTTTTGGCTC CGAGGGTAAT
AGTATCTCAG CAGGTCTAGA TCTGTTATTT GCCTCGCTAA ACTCAGCCAT GGAGCAACCT
AATGAGATTG CGCTTCGCCA AGGTGTACTC AATGAAGCAA AGGCATTAAC CCAAAGATTT
AACTCTATCA GTGAAGGGGT CCACACTCAG GTTAACCAGA TCGAAGGACA GATCGGCGCT
TCGGCCAAAG AGATTAATGC ACAGCTTGAA ACCATTTCTA GCTTTAACGA GCAAATTCAG
GCCTCTAATG CTAGCGGTAA TGTACCACTC TCCCTGTTAG ATGCACGTGA TGCGGCCATT
GATGATCTGT CAAAGATTAT TGACGTTAAT ATCGTGCATG ACGCCAATAA CATGGTGAAC
ATCTCTTTAG TTCAAGGACA ACCACTGCTA TCTGGAACTA CCGCCTCAAA AATACAGGTC
TCCCCCGATC CGTCCAATCC GCTTTTTAGC CAATTGAGCG TTCAATTTGG TCAATCAAGC
TTTCCGCTAG ATGAATCTGC CGGTGGCAGT TTAGGCGCTC TGCTTGATTA CCGTGATAAC
AGCCTTGTTG AATCGATAGC CTTTAATAAC GAATTGGCCC AGACAATGGC CGATGAGTTC
AACACGATAT TAAAGGCGGG TACCGACTTA AATGGTAATA CTCCGACTCA AGATCTATTT
ACTTATGACC CAACAAACCC TGCTGGCACA TTAAAAATTT CGGCCGACTT CAAGCCTGAC
ATGCTGGCTT TTGGTCAAGA TGGTACACCA GGCGATAACA GCAACTTAAA GGCATTAGTT
GAGCTAGCGG ATAAAAGCTT TACCTTCGAC TCCATGGGCA TTGATGCCAC CATGGGCGAT
GCTTTTGCCA GTAAAATTGG TGAACTGGGC TCAGCCTCTC GTCAGGCTAA AATGGCCAAA
GAAACCGCAG AAAAAGTGCA AATTGAAGCC CAATCTCAAT GGGCGAGTAC CAGTGGAGTC
AATATGGATG AAGAGGGGGT CAATCTCATC ATTTATCAGC AATCGTACCA AGCGAATGCC
AAAGTAATTT CGACTGCCGA TCAGCTTTTT CAAACCATAT TAAACAGTAT TTAA
 
Protein sequence
MSMLNIGMSG LNASMAALTA TSNNVSNAMV PGYSRQQVVM SSVGNGTYGS GSGVMVDGVR 
RISDQYQVTQ QWNATSNLGF AETQASYFGQ VEQIFGSEGN SISAGLDLLF ASLNSAMEQP
NEIALRQGVL NEAKALTQRF NSISEGVHTQ VNQIEGQIGA SAKEINAQLE TISSFNEQIQ
ASNASGNVPL SLLDARDAAI DDLSKIIDVN IVHDANNMVN ISLVQGQPLL SGTTASKIQV
SPDPSNPLFS QLSVQFGQSS FPLDESAGGS LGALLDYRDN SLVESIAFNN ELAQTMADEF
NTILKAGTDL NGNTPTQDLF TYDPTNPAGT LKISADFKPD MLAFGQDGTP GDNSNLKALV
ELADKSFTFD SMGIDATMGD AFASKIGELG SASRQAKMAK ETAEKVQIEA QSQWASTSGV
NMDEEGVNLI IYQQSYQANA KVISTADQLF QTILNSI