Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0051 |
Symbol | |
ID | 5660452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 66980 |
End bp | 68035 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641234564 |
Product | nucleotidyl transferase |
Protein accession | YP_001499915 |
Protein GI | 157959881 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis [T] Signal transduction mechanisms |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAACT CTTGGAAAAA TATTTTAATA AAACCTGAGG CGACAATACT TGATGCTCTT GGGGTTATCG ATAATGAAGC ATTGCAAGTT GCCTTAGTAG TTAATAGTGA ACAAAAACTA TTAGGTGTAA TAACCGATGG TGATATTCGT CGGGGGATAC TTAATAATTT GTCATTAGAC ACTCCCGTCA CCGAAATAAT GAATTGCTCA CCAATTACAG CAGAGATGAG CTCAACGAAA GAGCAATTGA CACAATTAAT GGAAAGTAAG AGCATACTTG CGATTCCGTT AATTGAAAAC GGCAAAGTTG TTGGTTTAGA AACATTACAG AGATTACTTG AAACAACAAT CTATCAAAAC CCTGTATTTA TAATGGCGGG AGGGTTTGGT ACTCGCTTAA GGCCTTTAAC AGATTCCTGT CCAAAACCGA TGTTGAAAGT TGGTGACAAG CCAATATTGG ATATATTAAT TACTAACTTT ATTAAAGCTG GTTTTGTCAA TTTCTATATA TCAACACATT ATATGGCTGA GCAAATTCGA AGCTACTTCG GTGATGGTAG TGAGTTAGGA GTGAAAATTC ATTATATTCA TGAAGAGGCT CCATTAGGTA CGGGGGGAGC ACTTGGTTTA CTGCCTGACG ACTTACCAAA AGGCTTACCT TTGATCATGG TGAATGGAGA TGTGCTCACC AAGGTTGATT TTGAAAGGCT ATTAGATTTT CATAATGAGC ATCAGGCCGA TGCCACCATG TGTGTACGAA AGTATGATTA TCAAGTTCCC TATGGCGTTG TTAGTGGCGA AGGGAACAAG GTTACCTGCA TGGTTGAAAA GCCGGTTCAA CATTTTTTTG TTAACGCAGG CATTTATGTC ATATCTCCAT GTGTGATTGA TTCTGTGCCT AAAGATTATC ATATCGATAT GCCTACTCTA TTGGATCAGC ATATGAGTGA GCGTGAAAAC GTTTTAATGT TTCCGGTTCA TGAATATTGG CTTGATATTG GTCGAATGGC TGATTTTGAA CGAGCTCAAA CAGATATTTT AAGTTTAGGT TTGTAA
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Protein sequence | MSNSWKNILI KPEATILDAL GVIDNEALQV ALVVNSEQKL LGVITDGDIR RGILNNLSLD TPVTEIMNCS PITAEMSSTK EQLTQLMESK SILAIPLIEN GKVVGLETLQ RLLETTIYQN PVFIMAGGFG TRLRPLTDSC PKPMLKVGDK PILDILITNF IKAGFVNFYI STHYMAEQIR SYFGDGSELG VKIHYIHEEA PLGTGGALGL LPDDLPKGLP LIMVNGDVLT KVDFERLLDF HNEHQADATM CVRKYDYQVP YGVVSGEGNK VTCMVEKPVQ HFFVNAGIYV ISPCVIDSVP KDYHIDMPTL LDQHMSEREN VLMFPVHEYW LDIGRMADFE RAQTDILSLG L
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