Gene Spea_0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0045 
Symbol 
ID5660446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp59964 
End bp61265 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content43% 
IMG OID641234558 
Producthypothetical protein 
Protein accessionYP_001499909 
Protein GI157959875 
COG category[S] Function unknown 
COG ID[COG2604] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGACC TTTTTCAGCT CAATATACAG ATCATTCAGA ATAGATGGCC AGACATTGCA 
GCAGGGTTAC TGCAGTGCGA CATCAACCAG CTCAAAGCAA ACTTAATAGA AGGGCGTGAG
CAAACTATCA GCGTAAACGG ATTACAGTTA AGTAGCCGTC ACTACCGCCA GCAAGAAGCT
GCGTTACTAG CATCTGACCT AGCAAAGCAA ACTGAGAACG TTCATTTATA TGGTGTCGGA
ATGGGTGATG TTCCTATACA CCTACTGCAA GAACACCAAG TGACTCAAAT TCACGTCCAC
CTAATTAACC AAACCGTATT TGCATTATTA ATAAGCTATA CCGACCAAAC GCAATGGCTA
ACACACCCGA GTATCACGCT CAACATATGC CCAACAAGCC AATTTCCGTT GGAGCCTTAC
ATTGCTAATC CCGCAGAGCT ATCCTTATGT GAGTGTAATG GCGAATACTC TTTAATCAGA
GACATTATTA TAGATGAGCT TAACCGTGAA TATGCGAATG ACAATGTCGC TAAACGTGTT
GCTCAATTTA ACGACCGCAT TCAGAATAAC CATGTTTTTT TGGATATTGA TCAAGACATT
AGTGCACTTA AATCCATAGC TAAAAATAAA GAAGCCTTCG TTATTGGTGC TGGACCAAGT
TTAGAAGAAC ACTACAGCTT TCTAGCATCC ATCAGCAAAC AACCTCTTCA CCACCGTCCC
ATAATCATCG CCGTTGATGC TGCAGCGAAA GGCCTGCTAG CTCATGGAGT CAAACTGGAT
ATTGTCGTTA CGATAGACGA AATGATTGAT AGCCACATAG TTGGTACGCA CACCGACTCG
AGTACCGCAT TAGTATACTT TCCAAAAGCA GATCCTGAGT TGCTCAACAA CTGGCCAGGG
GCACGTTACT GGAGTTTATC AAATAACGAC TGTTACAAAC TCCTTCATCA CTATAACCAC
ACCCAGTTAT TTACTAATGG TAGCGTTATC CATCCTGCCA CCGATTTGGC AGTAAAGCTT
AATTGCCAGC ATATAACCTT CTTTGGTGCT GATTTTGGCT ACCCTAATCA AAAAAGTCAT
GCCTATTGGC AAGATGGAGC ACTTGGAGGA CTCAAAGCTG CTCAATCTAG GCACTGGGTG
CTTGATGGCC ATGGTGAAAA GTTAGCAACT GCTTTAAGTT TCAGGTCATA CCTCAGGAGC
TTAGAGCTAT ATATTGCCAA TCACCCAGAG GTCTACTTTT ACCGCGCAAG TCAGCAAGGA
GCATATATTC AAGGCTCCCA ATTTAAAGAG CCGTCACTAT GA
 
Protein sequence
MTDLFQLNIQ IIQNRWPDIA AGLLQCDINQ LKANLIEGRE QTISVNGLQL SSRHYRQQEA 
ALLASDLAKQ TENVHLYGVG MGDVPIHLLQ EHQVTQIHVH LINQTVFALL ISYTDQTQWL
THPSITLNIC PTSQFPLEPY IANPAELSLC ECNGEYSLIR DIIIDELNRE YANDNVAKRV
AQFNDRIQNN HVFLDIDQDI SALKSIAKNK EAFVIGAGPS LEEHYSFLAS ISKQPLHHRP
IIIAVDAAAK GLLAHGVKLD IVVTIDEMID SHIVGTHTDS STALVYFPKA DPELLNNWPG
ARYWSLSNND CYKLLHHYNH TQLFTNGSVI HPATDLAVKL NCQHITFFGA DFGYPNQKSH
AYWQDGALGG LKAAQSRHWV LDGHGEKLAT ALSFRSYLRS LELYIANHPE VYFYRASQQG
AYIQGSQFKE PSL