Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0043 |
Symbol | |
ID | 5664650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 57162 |
End bp | 59639 |
Gene Length | 2478 bp |
Protein Length | 825 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641234556 |
Product | hypothetical protein |
Protein accession | YP_001499907 |
Protein GI | 157959873 |
COG category | [S] Function unknown |
COG ID | [COG2604] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACAT TAGATTTGCG TCTTGAACAT CAATTTTTTG TCAACGATTT TGGCGAGTAT TATCTACCTA GCGTAAACAG GAACACCTTC AAAAAAATAG ATTCAAATAC TATTTTCAAA CAAACCTTTA AAGATGAAAT ATTCCAAGAA GATCGGTTAC ACATCGTCAT AGGGACTGAC TCAGGTTTAC TACTAAATTA TATACTGATG AATGGCATCC CAAGCGGGAG TAAATATATT TTTATCGAAC CTGCTGCAGT ATTAGATATA CTCAACATTA ATATTGATGC TAAGTTTCAG CAACAAGTTA AATTAATTGA AATTGAAGAG TTTGCCAAAC AATTGGCAAA CGATGAATAT GACCTTTATC TGATTAAAAA TCAGTATATT ACGCACAACT CAATGGCATC GTGTGATGGT ATTGTTGAAG AATACAATAC CATTATCTAT AACGTGCAAA AACAGCTTAC CAACCTACAT TACGCCAGAA ATCGTTTAGT TCGCCACAAA GACTTTCTAA TCCAACAGTT AAGAAACATT GCAGATAATC AATACCCAGC CTCTTTATTA CGCAATAGAT TTGAAGGGAA GTCTTGTATT GTTATTGGTG GCGGCCCATC TCTTGACGAG CATATGGAAT GGATTACTAA AAACTACAAT CAATTATTTA TAATCACAGT ATCAAGGGTG GCCGCAAAGC TATCCAAAGC TAATATTCCT GCTCATATTA TCGTATCAAT TGATCCTCAC GACATTAGCT TTGAAGCAAA TATAGACACC ATGGCTTTGG CACAAGAAAG CTTACTTATC AATTCCTACC ACATAAACCA TCGCATTCTC TCACAATGGC AAGGGAGCTC CCTGTATGTA GGCCCAAGAA TCCCTTGGTC TAAAGCTGAT AGCGATAATG TTTCATCAGT AGGCCCAACT GTAACTAACA GTGCAGTCCG CATCGCAATC GAATTGGGGT TTTCAACAAT CTTACTAGCT GGAGCAGATT TCTGTCACTC CAGTACAGGG GCCTCACACG CCAAAGGGTC TGTTGAAGCT GACGCGGGAC TGAATCACAG TAGAATCGAT GAATGGGTAG AAACCTACGC CGGTAACAAG GCTGAAACCC CTGTAGAACT ATTAGGAGCG GCCCAAACGC TACAAATAGA AGCCGCAAAT CACCCAACTG TAAATATAAT CAATTTATCA ATCGATGCGG CCAAGCTTGA AGGAGTCAAC TATCAAGCTG CCGAAACGGT AAACTTGATG ACTACAGATA TGACACCAAA GCAGGTGTTA GATTTAATAG AAACTCTGAT AGAAGATAAA AGCCTATACC TCGACAATAT GCTGACAGAC TTACAGCTCT CAACAGAAAG CCTTAGTGAT ATCAATAAAC TATCACTTCA AGCTATCGAC CTTAATTTAG AGATAAAATC TGTCAGCGTA TCGTCAAAAA AATATCGAAA TATAGCCAAT AAAATTAGCC GTATAGAAGA ACAGATCGAT AACCAGCACG GTAAATTTTC TTATTTAGTC AAAGAATATG GTTACGTTGA ATTTGCAAAA TTCTTAACTA CAAAGGAAAG TAAGCACTGG ACTGCAGATG AGATGCAAAA AATGACTCAC CTGTACTACG AAGCGTTTAA ATGCTTAACA GAGGAGCTGC TAGGTTACAT AACAGATGCC ACTAATATTA TAAAAACTCG CCAGCTAGAA CTTATCAAAA ACGTCAATTT AGCTGAACTA ACTCGCCAAT GGGAACAACA CAATCAACCA GGAAGAGTTC ATATTTTCCA AAAGGTAAGA ACAGAACTTG GCCTAAGTTA CGATGATACT CATGAGTGCT TAACTGCAGC AAAAGCGAAT TACCACACCC AATTAACAGC AAAAACCCAT TCCTATTTTT CTATGAAAAA GACGAATTCA TCGCTTCATA ATACATTAGC GAAAATTACT GACTTATATA AAAGTAAAAA TAGCGCAGGG CTTCAACAGC TGTTCCATAG CATTGAGCCA ATGATAGAAA GTGATAGCTT AGCGCAACGT TTATTCTATC TAGCCAAAAG CTACGTGTTT ATCCTCAAAG AGGATAATAT GGCTGCATTA TCCGAATTAC AGAAAATTGA TGAGATTAAT CAAACGGAAG TAATCCTAAA ACAGATGATA GCACTTGCGT CAGAGCTTCA AATAATTGAT GTTACTGTAC AATCCCTTGC GAAAATAACG GCCTTTAGTA ATGAGTATTT ACCCTTATAT GCCCATGCCT TAACAATTCA AGGCGATAAT ATTCAAGCCA TCAATACCTA CTTAGATTAT TTGGACGTCA TGCCAAACGA TACAAAAGTA CGCTTAAGCC TTGGGATATT CTTACTGAAG ATAGGGCAGG TAGATGGCGC TATAACCTGC TTCAAGCAAG TATTAACGGT CGATATTAAC AACTTAAGTG CACTAAGTTA CCTGAAACAA CTAGTCCCTA CTCAATAG
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Protein sequence | MNTLDLRLEH QFFVNDFGEY YLPSVNRNTF KKIDSNTIFK QTFKDEIFQE DRLHIVIGTD SGLLLNYILM NGIPSGSKYI FIEPAAVLDI LNINIDAKFQ QQVKLIEIEE FAKQLANDEY DLYLIKNQYI THNSMASCDG IVEEYNTIIY NVQKQLTNLH YARNRLVRHK DFLIQQLRNI ADNQYPASLL RNRFEGKSCI VIGGGPSLDE HMEWITKNYN QLFIITVSRV AAKLSKANIP AHIIVSIDPH DISFEANIDT MALAQESLLI NSYHINHRIL SQWQGSSLYV GPRIPWSKAD SDNVSSVGPT VTNSAVRIAI ELGFSTILLA GADFCHSSTG ASHAKGSVEA DAGLNHSRID EWVETYAGNK AETPVELLGA AQTLQIEAAN HPTVNIINLS IDAAKLEGVN YQAAETVNLM TTDMTPKQVL DLIETLIEDK SLYLDNMLTD LQLSTESLSD INKLSLQAID LNLEIKSVSV SSKKYRNIAN KISRIEEQID NQHGKFSYLV KEYGYVEFAK FLTTKESKHW TADEMQKMTH LYYEAFKCLT EELLGYITDA TNIIKTRQLE LIKNVNLAEL TRQWEQHNQP GRVHIFQKVR TELGLSYDDT HECLTAAKAN YHTQLTAKTH SYFSMKKTNS SLHNTLAKIT DLYKSKNSAG LQQLFHSIEP MIESDSLAQR LFYLAKSYVF ILKEDNMAAL SELQKIDEIN QTEVILKQMI ALASELQIID VTVQSLAKIT AFSNEYLPLY AHALTIQGDN IQAINTYLDY LDVMPNDTKV RLSLGIFLLK IGQVDGAITC FKQVLTVDIN NLSALSYLKQ LVPTQ
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