Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0042 |
Symbol | |
ID | 5660443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 43968 |
End bp | 44525 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641234549 |
Product | carbonic anhydrase |
Protein accession | YP_001499906 |
Protein GI | 157959872 |
COG category | [R] General function prediction only |
COG ID | [COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000058127 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAGCT CGAGAAACAA TAAGTCACTG CGATCATATA AGGGAACCGT GCCAGCGCTT AAGAAGGATG TTTATGTCGA TCAAGACTGT GTGCTTGTGG GCGATATTAC CTTAGATGAT GACTCTAGTG TTTGGCCTTT AGTTGCCGCA CGTGGTGATG TAAATCATAT CTATATAGGT AAGCGCTCAA ATATCCAAGA CGGTACCGTG TTGCATGTCA CTCGAAAATC ACCATCGTTG CCAGAAGGCC ACCCATTGAT CATTGGTGAT GACGTGACAA TTGGACACAA GGCTATGCTC CATGGGTGTA AGGTCGGTAA TCGTATTTTA GTCGGCATGG GCGCCATCAT TTTGGATGGT GCCATATTAG AAGATGATGT GATCTTGGGA GCAGGCTCTT TAGTACCACC AGGTAAAGTA CTTAAGAGCG GCTATCTTTA CGTGGGCAGT CCAGCGAAAC AGGCGCGCCC ATTGACGGAA GCGGAGCTTG CCTTCCTGCC CCAGTCGGCT GATAACTATG TCAGGCTTAA GAATGAGTAT TTGCAAGAAG GCGAATAG
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Protein sequence | MTSSRNNKSL RSYKGTVPAL KKDVYVDQDC VLVGDITLDD DSSVWPLVAA RGDVNHIYIG KRSNIQDGTV LHVTRKSPSL PEGHPLIIGD DVTIGHKAML HGCKVGNRIL VGMGAIILDG AILEDDVILG AGSLVPPGKV LKSGYLYVGS PAKQARPLTE AELAFLPQSA DNYVRLKNEY LQEGE
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