Gene Spea_0036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0036 
Symbol 
ID5660437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp40012 
End bp40575 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content46% 
IMG OID641234543 
ProductDNA topoisomerase type IA Zn finger domain-containing protein 
Protein accessionYP_001499900 
Protein GI157959866 
COG category[L] Replication, recombination and repair 
COG ID[COG0551] Zn-finger domain associated with topoisomerase type I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAAA TAGATCAGCA ATTGTTTACT ACGCACGAGC ACGCTCTTGA GAAAGAGTTT 
GAGCTTTGCC CCAAGTGTGG CTGCGAGTTG TCGGTAAAGC ACAGTAAGCA CGGTGGTTTT 
ATTGGATGTA ATAACTATCC AAGTTGTGAT TACACTAGGC CACTGGTGCA GCATGAGTCG 
ATAGAGACTC AAGTTATTGA AGGCTCCGTT TGCCCAGATT GTGGCAATGA GTTGGCGGTT 
AAGTCGGGCC GATTTGGTAT ATTTATCGGT TGTACTAACT ATCCTGCATG CAGCCATATA 
GAGAAGCATG ATCAGAGCGA TAGCAAAGAT GAGATCCCTT GCCCTAAGTG CAAAACGGGC 
CATATCGAGC ATAGAACCAG TCGATTTGGT AAGTCTTTCT ATGCTTGTAG TGCCTACCCT 
AAGTGCAAGT TCTTAGTCAA CTATCCCCCA GTTGCTGAAA CTTGTCCTGA CTGTGGTTTT 
GGTATCTTAG TTGAGCGCAA AGGGGCCGCG GGATTGCGCT TAGAGTGCCC AGAAAAAACG 
TGCAAATATA AGCGCCCAGT TTAA
 
Protein sequence
MAKIDQQLFT THEHALEKEF ELCPKCGCEL SVKHSKHGGF IGCNNYPSCD YTRPLVQHES 
IETQVIEGSV CPDCGNELAV KSGRFGIFIG CTNYPACSHI EKHDQSDSKD EIPCPKCKTG 
HIEHRTSRFG KSFYACSAYP KCKFLVNYPP VAETCPDCGF GILVERKGAA GLRLECPEKT 
CKYKRPV