| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0035 |
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| Symbol | |
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| ID | 5660436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 38252 |
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| End bp | 39811 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641234542 |
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| Product | collagenase |
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| Protein accession | YP_001499899 |
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| Protein GI | 157959865 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCAGT GTCGATCAAC AAGCTACTAT TTCCGCGCCT TTAGTTATTA CGGCCCAGTA
GATGATCTTA CCGATGCTGA TACTGTCGCT TTAGCGCTAA CACTTGAGGA ACTTAGTGAT
TCAGGCCTAC TCGATAACCA AGCACGCTTG CAAGAGCAGT ATGCCGTCAC CCTATACCGT
TACTTTGCAG ATAACGATGC GGCTGAAGCC TTAGCTCCGT TACTCGCTCA GTTAGATTCA
CAACTAAAGC AACTGGCAAC ATCAACGCCT AATACAAGCA ATGACTATGC GTTGCTAGAA
ACTCTCAAAG CCTACGGTTT CCTACTTAAT AAGAGCCGTA AAGATGTCGA TGGCGAGCTT
AACAAAGTAT TACTAGCAGC CGATCTAAAT ACACCGCTAC TCGAGTTTGC AGCGAGTCCA
GCGAGTATTC GTGCCGAGAG TGATTGGCCA CGCACCAATG CATACTGGGC CTTAGCACTG
TACCGCCTCG CCCTTCCATC ATCAGAAGAT GGTGAAGAGA CCGAGCAAGA GCTTGCCGTA
GATGAAGCCG TAGCTGCAAT AGCTAAAGCC GACGTAACGC TACGTGGTGA TGCCGCAAAA
GATGCTTATA CGGCAGGCTT TCATGTAAAC GTATTTGGCG GCCAAGAGCT GTGTGAAGAG
AATAGCGAAA TATGCCGTAT TCCAGAGCTT AAAACCGCCC TACCTATTGA GCACCATTGC
TCTGATAGCC TATTCATATT GACACAAGAT CTAAACGAAC AAGAACTAGC TGAGAGCTGC
ACCAAGCTGA CATCTCAAGA GTCTAACTTC CACAACGTGC TAGAAACCAA ACTTGAGCCT
GCGCCCAATG ACTTTAATAC CGCCCTTAGA GTCGTCGCCT TTAAGAACTG GAGCCAATAT
CACTTAAATG GTCAGCTTAT CTTCGACATC AATACCGATA ACGGTGGGAT GTATATCGAA
GGTACACCGT CAAAACCCGG TAACCAAGCC ACCTTCTTTG CTTACCGCCA ATGGTGGATT
GAGCCAGAAT TTAAAGTCTG GAACTTGAAC CATGAATATG TGCACTATCT CGATGGTCAC
TTCGTAAAAT ACGCTGGATT TGGCCACTTC CCCGAGAAAA TGGTGTGGTG GTCTGAAGGT
CTAGCCGAAT ACATCTCTAA AGGTGATAAC AACCCATCGG CACTTCGCGT TATTAAGCGT
GATATAGAAG AAGCTCCTAC TCTAGAAGAG ATCTTTGCCA CCGAGTATAA GGATGGCCAA
GACAGAACTT ACAAGTGGAG CTACATGGCG ATTCGCTTCC TAGCGGAAAA CCACCACACT
GAGTTTGTAC AGTTAAGCCA TTACCTTAAA ACCGACTACT TTGAAGGCTA TGACCAGCTA
ATGGCTTCAT TGACTGAACA TCAACCCCAG TTTGCCGATT GGTTAAACAC TCAGGTTAAT
GCCTTTAATG ATAGTGAAGA GGAAGCAAAG CCAAGACTGC ACAAGCAGGG TAGATATGAC
TACCGTGACT ATTTGCAGCC ACAGCATTTA GCCCATGGTG AGAACCATCT GAAGTTCTAG
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| Protein sequence | MRQCRSTSYY FRAFSYYGPV DDLTDADTVA LALTLEELSD SGLLDNQARL QEQYAVTLYR
YFADNDAAEA LAPLLAQLDS QLKQLATSTP NTSNDYALLE TLKAYGFLLN KSRKDVDGEL
NKVLLAADLN TPLLEFAASP ASIRAESDWP RTNAYWALAL YRLALPSSED GEETEQELAV
DEAVAAIAKA DVTLRGDAAK DAYTAGFHVN VFGGQELCEE NSEICRIPEL KTALPIEHHC
SDSLFILTQD LNEQELAESC TKLTSQESNF HNVLETKLEP APNDFNTALR VVAFKNWSQY
HLNGQLIFDI NTDNGGMYIE GTPSKPGNQA TFFAYRQWWI EPEFKVWNLN HEYVHYLDGH
FVKYAGFGHF PEKMVWWSEG LAEYISKGDN NPSALRVIKR DIEEAPTLEE IFATEYKDGQ
DRTYKWSYMA IRFLAENHHT EFVQLSHYLK TDYFEGYDQL MASLTEHQPQ FADWLNTQVN
AFNDSEEEAK PRLHKQGRYD YRDYLQPQHL AHGENHLKF
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