| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0021 |
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| Symbol | |
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| ID | 5660422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 24810 |
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| End bp | 26267 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641234528 |
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| Product | TrkH family potassium uptake protein |
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| Protein accession | YP_001499885 |
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| Protein GI | 157959851 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAATATC GAACAATTAT AAGAATCACA GGCCTGTTAA TGGGGCTGTT TTCTTTATCT
TTACTTCCTC CAGCCCTTGT CGCCGTTATC TATAAAGATG GCGGTGGTAT GGCCTTTATT
CAGGCATTTG TGTTGTGCCT GATCTTGGGC TTTGGACTTT GGTACCCTAA CCGTGCACAC
CGCAAGGACT TGCGGACCCG AGAGGGCTTC CTATTGGTAG TGATGTTTTG GGTGGTACTG
GGCTCCATTG GTGCCGTGCC ATTTATCTTC TCTGGTCAAC CCTCTCTCAG TTTAACCGAC
AGTTTCTTTG AATCTTTTTC GGCGCTGACT ACCACTGGTG CCACGGTGAT TGTGGGTCTA
GATAGTCTGC CCAAGGCGAT TCTATTCTAT CGACATCTAC TACAGTGGCT AGGTGGTATG
GGGATCATCG TACTTGCTGT GGCGATTCTA CCCGTACTCG GTGTAGGAGG CATGCAGCTG
TATCGAGCTG AAATGCCGGG GCCAGTGAAA GACAGTAAGA TGACGCCGAG GATTGCCGAG
ACCGCCAAGG CGCTGTGGTA TATCTATTTA GCGCTAACGG TCGCCTGCGC AGTTGCTTAT
TGGCTGGCGG GAATGGATAC ATTTGACGCT ATCTGTCACT CATTCTCGAC CATTGCGATT
GGTGGTTTCT CTACTCATGA TGCCAGTATG GGTTACTTCG ATAGCCCTAC AATCAACATG
ATTTGCGTGG TGTTCCTATT GATTGCTGCG CTCAATTTTA GTCTGCACTT TGCGGCATTT
TCTCGTCGCG GTATTAACCT GCGAGTTTAT TTTCGCGACG CAGAATTTAA GGTGTTGATC
GCTATTCAGT TGGTGCTAAC GGCTATCTGT TTTGTCACCC TCTATGGCTC AGGGATCTAT
GATTCGGCCG AGGAAACCTT CGATTACGCT CTGTTTCAGG CGGTATCAAT TTCAACTACC
GCAGGCTTCG GCACTGAAAG TTTCCATGCT TGGCCTTTGT TCTTACCGAT CCTACTGATT
TTTTCGAGTT TTATAGGTGG CAGCGGTGGC TCAACCGCAG GTGGTATTAA AGTCATTCGA
GTGATTCTAT TGCTGCTACA AGGCTCGCGT GAACTTAAGC GTCTAGTTCA TCCTCGTGGC
ATGTTCTCTA TTCGAATCAG CGGTAACGCA CTGCCAGATA GGGTTATCGA TGCGGTCTGG
GGGTTCTTCT CGGCTTATGC TTTGGTGTTT GTTGTTTGCA TGTTGATCTT GATGGCTTTG
GGAATGGATG CCATCACAGC TTTTAGTGCA ACGGCGGCTT GTTTGAACAA CCTCGGCCCA
GGCTTAGGTG AGGTTGCTAG TAACTACGCC AGTATCGGTG ATGGTGAAAA ATGGGTACTG
CTATTCGCCA TGCTATTCGG TCGTTTAGAA GTGTTTACTT TACTTATTTT GTTTACGCCA
ACATTCTGGA AAAACTAA
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| Protein sequence | MQYRTIIRIT GLLMGLFSLS LLPPALVAVI YKDGGGMAFI QAFVLCLILG FGLWYPNRAH
RKDLRTREGF LLVVMFWVVL GSIGAVPFIF SGQPSLSLTD SFFESFSALT TTGATVIVGL
DSLPKAILFY RHLLQWLGGM GIIVLAVAIL PVLGVGGMQL YRAEMPGPVK DSKMTPRIAE
TAKALWYIYL ALTVACAVAY WLAGMDTFDA ICHSFSTIAI GGFSTHDASM GYFDSPTINM
ICVVFLLIAA LNFSLHFAAF SRRGINLRVY FRDAEFKVLI AIQLVLTAIC FVTLYGSGIY
DSAEETFDYA LFQAVSISTT AGFGTESFHA WPLFLPILLI FSSFIGGSGG STAGGIKVIR
VILLLLQGSR ELKRLVHPRG MFSIRISGNA LPDRVIDAVW GFFSAYALVF VVCMLILMAL
GMDAITAFSA TAACLNNLGP GLGEVASNYA SIGDGEKWVL LFAMLFGRLE VFTLLILFTP
TFWKN
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