Gene Spea_0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0019 
Symbol 
ID5660420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp22709 
End bp24031 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content45% 
IMG OID641234526 
Productproline dipeptidase 
Protein accessionYP_001499883 
Protein GI157959849 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAGT TAGCGCGCCT CTATCATGAC CATATTCAAG TGCTTAATCA GCGTGTCAGC 
GAAATCATTT CTCGTGAAAA CTTATCGGGT CTCGTCATCC ATTCAGGTCA GCCACATAGA
CAGTTTTTAG ATGATATGGA TTACCCATTT AAGGTGAACC CACACTTTAA AGCTTGGTTG
CCGGTCATCG AAAACCCAAA TTCATGGTTG GTGATAAACG GCAGTGATAA GCCCCTATTG
ATTTTTTATC GCCCGGTAGA TTTTTGGCAC AAGGTTGCCG ATGAGCCGAG TGACTTTTGG
GCCGAGCATG TCGACATCAA GTTTCTAACT AAGGCCGACA AAGTAGCCGA ATATCTGCCA
GCGGGTATCG ATAATTGGGC CTATATTGGT GAGCATTTAG ATGTTGCCGA TGTGCTGGGT
TTTAGCAGGC GTAATCCTGA TTCAGTATTG AGCTATCTCA ACTATCACCG CGCGACCAAA
ACCGATTATG AGTTAGCCTG TATGCGTAAA GCTAATGAAA TAGCGGTGAC CGGGCATCAA
GCGGCTAAAA CAGCATTCTA TAATGGTGCG AGTGAATTTG AGATCCTACA GGTCTATCTG
TCGGCAATCT CACAAGGTGA AAACCAAGTC CCCTATAGCA GCATCGTTGC GCTAAATGAA
AACTCCGCCA TCTTACATTA CACCGCGCTT GAATATACGA GCCCAGCGCA GCGGCGTTCA
TTCTTGATCG ACGCAGGCGC TAACTATAAT GGTTATGCCT CCGATATTAC CCGTAGCTAT
TCATTTGAGA AGAACATCTT CGATGATCTG ATCACCGCAA TGGACAATAT GCAGCTACAG
ATCATAAGCA TGATGAAGCC TGGTGTGAGC TATGCTGAAT TACACATACA AACTCATTAT
AAGCTAGCGC AGATCTTGCT GGATTTTGAT ATTGTCAGCG GCGATGTTCA GGGCCTTGTC
GAACAGGGAA TTACTCGAGT CTTTTTCCCC CATGGTTTAG GCCATATGTT AGGCATACAA
GTGCACGATA TGGGAGGTTT CCTCAGCGAT GAAAAGGGCA CTCATGTCGC AGCACCTGAG
GCACATCCAT TCTTACGTTG TACTCGAGAA CTTGATATCA ACCAAGTACT GACGATAGAG
CCGGGTGTTT ATATTATCGA TTCGCTACTC GCAGAGTTAA AACAGGATCA GAGGCAATCA
CAGATCAATT GGAATACCGT TGATGTCTTA AGGCCGTTTG GTGGTATTCG CATCGAAGAT
AATGTAATTG TTCATGGCGA TCGTATCGAG AATATGACCC GTAATTTGGG TTTGAATCGT
TAA
 
Protein sequence
MEQLARLYHD HIQVLNQRVS EIISRENLSG LVIHSGQPHR QFLDDMDYPF KVNPHFKAWL 
PVIENPNSWL VINGSDKPLL IFYRPVDFWH KVADEPSDFW AEHVDIKFLT KADKVAEYLP
AGIDNWAYIG EHLDVADVLG FSRRNPDSVL SYLNYHRATK TDYELACMRK ANEIAVTGHQ
AAKTAFYNGA SEFEILQVYL SAISQGENQV PYSSIVALNE NSAILHYTAL EYTSPAQRRS
FLIDAGANYN GYASDITRSY SFEKNIFDDL ITAMDNMQLQ IISMMKPGVS YAELHIQTHY
KLAQILLDFD IVSGDVQGLV EQGITRVFFP HGLGHMLGIQ VHDMGGFLSD EKGTHVAAPE
AHPFLRCTRE LDINQVLTIE PGVYIIDSLL AELKQDQRQS QINWNTVDVL RPFGGIRIED
NVIVHGDRIE NMTRNLGLNR