| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0017 |
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| Symbol | fadA |
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| ID | 5660418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 19009 |
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| End bp | 20172 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641234524 |
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| Product | 3-ketoacyl-CoA thiolase |
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| Protein accession | YP_001499881 |
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| Protein GI | 157959847 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02445] fatty oxidation complex, beta subunit FadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAACG CCGTTATCGT AGATTGCATT CGTACTCCAA TGGGTCGCTC AAAGGCTGGA
GTATTTAGAA ATGTACGCGC AGAAACTCTT TCTGCTGAAC TAATGAAGTC GCTACTTGAG
CGCAACCCAA AGCTTGACCC AAACACCATC GAAGATGTGA TGTGGGGTTG TGTGCAGCAA
ACCCTAGAGC AAGGCTTTAA TATTGCCCGT AACGCCGCCC TACTCGCTGG CATTCCAAAA
CAAGTCGGTG CTGTTACCGT AAACCGTTTA TGTGGTTCAT CTATGGATGC CCTACATCAG
GCTGCTCGTG CGATTATGAC TGGCCAAGGT GATACCTTTA TTGTTGGTGG TGTTGAACAC
ATGGGCCACG TACCGATGAA CCATGGTGTC GACTTCCATC CAGGTCTTGC TAATAACGTA
GCAAAAGCTT CTGCCATGAT GGGGCTTACA GCTGAGATGC TAGGTAAGAT GCATGGAATT
ACTCGTGAGC AGCAAGATGC CTTTGCGGTT CGCTCGCATC AACGTGCTCA CGCAGCTACA
GTTGAAGGCC GCTTCGCCAA TGAAATCGTA GCGATTGAAG GTCATGACGC CGATGGCGCA
TTGATTAAAG TCGAGCATGA TGAAGTGATC CGCCCTGAAA CCTCGATGGA ATCGCTATCG
GGTTTACGCC CAGCTTTTGA CCCAGCTAAC GGCACAGTTA CCGCAGGTAC CTCTTCTGCA
CTTTCAGATG GCGCCTCTGC CATGTTAGTC ATGGAAGAGG AAAAAGCCAA AGCGTTAGGC
CTGCCTATTC GTGCCCGTAT CCGCTCTATG GCTATTGCCG GTTGTGATGC TGCTATTATG
GGTTATGGCC CTGTACCTGC CACTCAAAAA GCCCTTAAGC GTGCAGGCCT AACCGTTGAT
GACATGGATG TTATCGAGCT TAATGAAGCC TTCGCCGCTC AGTCTCTACC TTGTGTTAAA
GACCTAGGTT TGATGGATGT GGTCGAAGAC AAAGTTAACC TCAACGGTGG TGCCATTGCA
CTAGGTCATC CACTAGGTTG TTCAGGTACG CGTATTTCAA CGACCTTGAT TAACCTGATG
GAAGCCAAAG ATGCCAAATA TGGTCTTGCG ACCATGTGTA TCGGTCTAGG CCAAGGTATC
GCGACTATCT TCGAGCGCCC ATAA
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| Protein sequence | MKNAVIVDCI RTPMGRSKAG VFRNVRAETL SAELMKSLLE RNPKLDPNTI EDVMWGCVQQ
TLEQGFNIAR NAALLAGIPK QVGAVTVNRL CGSSMDALHQ AARAIMTGQG DTFIVGGVEH
MGHVPMNHGV DFHPGLANNV AKASAMMGLT AEMLGKMHGI TREQQDAFAV RSHQRAHAAT
VEGRFANEIV AIEGHDADGA LIKVEHDEVI RPETSMESLS GLRPAFDPAN GTVTAGTSSA
LSDGASAMLV MEEEKAKALG LPIRARIRSM AIAGCDAAIM GYGPVPATQK ALKRAGLTVD
DMDVIELNEA FAAQSLPCVK DLGLMDVVED KVNLNGGAIA LGHPLGCSGT RISTTLINLM
EAKDAKYGLA TMCIGLGQGI ATIFERP
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