| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0006 |
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| Symbol | glyS |
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| ID | 5660407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 7582 |
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| End bp | 9651 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641234513 |
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| Product | glycyl-tRNA synthetase subunit beta |
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| Protein accession | YP_001499870 |
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| Protein GI | 157959836 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTTG AAAACTTACT GATTGAAATC GGTACTGAAG AGTTACCTCC AAAATCACTG
CGTAAACTGG CTGAGTCTTT CTTAGCTAAT TTTACCGAAG AGCTAACAAA AGCAGAGCTA
AGCTTTGAGT CTGCTGTATG GCACGCTGCG CCACGTCGTC TAGCTATCTG CATTAATCAA
CTTGCACTGG CTCAGGCTGA CAAAGTAGTT GAGAAACGCG GACCCGCTGT AGCACAAGCT
TTCGATGCCG ATGGTAATCC AACTAAAGCC GCTATGGGCT GGGCCCGTGG TAACGGTATT
ACAGTTGAGC AAGCTGAGCG TTTAAAGACA GATAAAGGCG AATGGTTACT ACACCAAGCA
CGTGTAGTCG GTGTTGAGAC TAAGAGCCTA ATTGCCGATA TGGCGCAACG GTCTTTAGAC
AAATTACCTA TTCCAAAGCC AATGCGTTGG GGTAGCAATA CCACGCAATT TATCCGTCCT
GTTCACACAG TTACCATGTT ACTTGGTAGT GAAGTGGTTG ACGGTGAGCT ACTAGGCATC
AAGTCTGATC GCATTATTCG TGGTCACCGC TTTATGGGTG AGTCTAGCTT CAAGCTAGAT
CATGCCGACA ACTACCTTGT TGCGCTAAAA GAAAAAGGTA AGGTACTAGC GGATTATGAA
GCGCGTAAGG CAATCATCAA GACTGATGCC GAAGCTGCAG CAGCTAAAAT TGGTGGCGTA
GCCGATTTAG AAGATGACCT ACTTGAAGAA GTGACCTCTT TGGTTGAATG GCCAGTAGTA
CTAACGGCAA GCTTCGAAGA GAAGTTCTTA GATGTGCCAG CTGAAGCCTT GGTTTACACC
ATGAAAGGCG ACCAAAAATA CTTCCCAGTA TTTGATAACG CTGGTCAGTT ACTGCCTAAC
TTTATCTTCG TAACTAACAT CGAATCTAAA GATCCACAGC AGATTATTGC CGGTAACGAG
AAAGTGGTTC GCCCACGTCT CGCCGATGCT GAGTTCTTCT TCGAAACAGA TAAGAAAGAC
ACACTTGAAG CTCGCCTTAC TAGCCTAGAA ACCGTTGTAT TCCAAAAGCA GCTTGGCACT
ATTAAGCAAC GTGTTGAACG TATCTCAGCT ATGGCTGGTT ACATTGCCAC TAGCATCGAT
GCTAACAGCG AAGAAGCGGC GCGTGCAGGT CTATTATCTA AGTCAGATTT GATGACTAAC
ATGGTAATGG AGTTTACTGA CCTTCAAGGC ACCATGGGTA TGCATTACGC CCGCCTAAAT
GGTGAAACGG AAGCGGTAGC CGTAGCTCTG TCTGAGCAAT ATAAGCCTAA GTTCTCTGGT
GATACCGTAC CAACAGCACC TATCTCTATC TGTGTTGCAC TCGCTGAAAA ACTAGACACG
CTAGTGGGTA TCTTTGGTAT TGGCCAAGCG CCTAAAGGTG CTGCGGATCC ATTCGCACTT
CGCCGTGCAG CAATTGGTGT GCTACGTATT TGTTTAGAGA ACAACTTACC GCTAGATCTT
GTTGATTTAA TTGCTAAAGC ACAAGAGCTA CACGGAGAGA ATCTCACTAA CGCAGATGTT
GCCGAGCAAG TACTTGAGTT CTTTATGGCT CGCTTCCGCG CTTGGTATCA AGATCAAGGC
GTGAGTGTAG ACGTGATTCT AGCAGTATTA GCTCGTCGCC CTACCGCTCC TGCCGATTTT
GAAAGCCGCA TTAAAGCTGT TGCTCACTTC AGAACTCTTG AACAAGCATC TGCACTTGCT
GCTGCTAATA AGCGTGTATC TAACATCTTG GCTAAAGTTG AAGGCGAGTT ACCTGCTGCT
ATCGACGATA AGCTACTTGT TGAAGCCGCT GAAAAAGCGC TGGCTGAAAA GCTTGCAGAA
TTGCAACCAC AGCTAGCGCC ACTATTTGCA GCCGCTAACT ATCAAGAAGC ATTAGCGTTA
CTAGCTAGCC TACGTGAAAG CGTTGATACC TTCTTCGAAG ATGTGATGGT AATGGCTGAT
GATGAAGCGC TAAAGAACAA CCGCCTAGCG CTACTATCTA GCCTGCGAGA GCAGTTCTTA
CATGCTGCAG ATATTTCACT GCTTCAGTAA
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| Protein sequence | MNFENLLIEI GTEELPPKSL RKLAESFLAN FTEELTKAEL SFESAVWHAA PRRLAICINQ
LALAQADKVV EKRGPAVAQA FDADGNPTKA AMGWARGNGI TVEQAERLKT DKGEWLLHQA
RVVGVETKSL IADMAQRSLD KLPIPKPMRW GSNTTQFIRP VHTVTMLLGS EVVDGELLGI
KSDRIIRGHR FMGESSFKLD HADNYLVALK EKGKVLADYE ARKAIIKTDA EAAAAKIGGV
ADLEDDLLEE VTSLVEWPVV LTASFEEKFL DVPAEALVYT MKGDQKYFPV FDNAGQLLPN
FIFVTNIESK DPQQIIAGNE KVVRPRLADA EFFFETDKKD TLEARLTSLE TVVFQKQLGT
IKQRVERISA MAGYIATSID ANSEEAARAG LLSKSDLMTN MVMEFTDLQG TMGMHYARLN
GETEAVAVAL SEQYKPKFSG DTVPTAPISI CVALAEKLDT LVGIFGIGQA PKGAADPFAL
RRAAIGVLRI CLENNLPLDL VDLIAKAQEL HGENLTNADV AEQVLEFFMA RFRAWYQDQG
VSVDVILAVL ARRPTAPADF ESRIKAVAHF RTLEQASALA AANKRVSNIL AKVEGELPAA
IDDKLLVEAA EKALAEKLAE LQPQLAPLFA AANYQEALAL LASLRESVDT FFEDVMVMAD
DEALKNNRLA LLSSLREQFL HAADISLLQ
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