| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0004 |
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| Symbol | |
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| ID | 5660405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3924 |
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| End bp | 6365 |
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| Gene Length | 2442 bp |
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| Protein Length | 813 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641234511 |
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| Product | DNA gyrase, B subunit |
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| Protein accession | YP_001499868 |
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| Protein GI | 157959834 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.821769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATAACC GACGAGAGAA TAATATGTCA GAGAATAGTT ATGATTCTTC GAGTATTAAG
GTTCTAAAGG GCCTTGATGC GGTACGTAAA AGACCAGGCA TGTACATCGG TGATACCGAT
GATGGTACAG GTCTACATCA CATGGTATTC GAAGTAGTCG ATAACTCTAT CGATGAAGCG
TTAGCGGGCC ACTGTAACGA CGTCATTATT ACCATTCATG CCGATGGTTC TGTATCGGTT
CGAGATGACG GCCGTGGTAT TCCGGTATCG ATCCACGAAG AGGAAGGTAT CTCTGCTGCT
GAAGTTATTA TGACCGTACT TCACGCTGGT GGTAAATTCG ATGATAACTC TTATAAAGTA
TCGGGTGGTT TGCACGGTGT TGGTGTGTCG GTTGTAAACG CACTATCTTC AAAGCTGCAG
ATGACTATCC GTCGTGACGG CAAAGTATAC GAGCAATTCT ACACCCACGG TGTACCAGAT
GCTCCTATTG CACCGATTGG CGAAGCGACT AAGACTGGTA CAGAAATCCG TTTTTGGCCA
AGCACTGAGA CATTCACTGA CGTCTTGTTC CATTTCGATA TCTTAGCTAA GCGTGTTCGT
GAACTGTCAT TCTTGAACTC AGGTGTGGGT ATTCGTCTTG TTGATGAGCG TGATAACCGT
GATGAATTCT TCAAATACGA AGGCGGTATC AGTGCATTTG TTGACTACTT AAACGTTAAC
AAAACACCGG TAAACAAAGA AGTATTCCAC TTCTGTCAAG AGCGTGAAGA CGGTATTACC
GTTGAAGTCG CTATGCAATG GAACGATGGT TTCCAAGAGA ATATCTTCTG TTTTACCAAC
AATATTCCAC AGCGCGATGG TGGTACTCAC TTAGCGGGCT TCCGTGGTGC GTTGACACGT
AACTTGAATA ACTACATGGA ACGTGAAGGG TATAATAAGA AAGGTAAGAC TGCTGCAACG
GGTGATGACG CTCGTGAAGG TCTAACTGCA GTTATTTCAG TTAAAGTGCC GGATCCTAAG
TTCAGTTCAC AGACTAAAGA TAAGTTAGTT TCTAGTGAGG TAAAGTCTGC TGTTGAGCAA
ACTATGGGCG AGCAGTTAGG TGATTACCTA ATGGAGCATC CAAACGAAGC TAAGTTAATT
GTTGGTAAGA TTATCGACGC AGCGCGTGCT CGTGAAGCGG CACGTAAAGC GCGTGAAATG
ACTCGTCGTA AGGGCGCATT AGATTTAGGT GGTTTGCCGG GTAAGCTTGC TGACTGCCAA
GAGAAAGATC CTGGTCTTTC TGAAATTTAC ATAGTGGAGG GTGACTCAGC TGGTGGCAGC
GCCAAGCAGG GTCGTAACCG TAAGAACCAA GCGATTCTTC CACTAAAAGG TAAGATCCTA
AACGTAGAGA AAGCGCGTTT CGATAAGATG CTATCTTCGC AAGAAGTGGC AACACTAATC
ACTGCACTAG GTTGCGGTAT TGGTCGTGAC GAATATAACC CAGATAAGAC CCGTTATCAC
AACATCGTTA TCATGACCGA TGCTGACGTC GACGGCTCGC ACATTCGTAC CTTGCTGTTG
ACCTTCTTCT TCCGTCAAAT GCCTGAGCTT ATTGAGCGTG GCTATGTATA TATTGCACAA
CCACCTTTGT ACAAGGTTAA GAAAGGTAAG CAAGAGCAAT ATCTGAAAGA TGATCCAGCA
TTGACTGAGT ACTTAACGAC TCAAGCACTT GATAATGCCA ACATCTATCC TTCGCAGGGG
GCACCAGGTA TGTCTGGTCA GCCACTAGAG CGTTTGGTTA ATCAGTATCG TGAAGTGGAA
GCTATCATTG CTCGTCTAGA GCAGCGTTAC CCAACTAACA TTACCGATCT AATGCTATAT
CACCCAGCAA TCACTAATGA GATGTTGAGT GATGAAGCAC AAATCAAAGC TTGGGCTGAC
GTGTTTGTAG CTGATTTAAT TGATAAAGAG ACTGGCGGTA TTTTATATAG TGCTGAGCCA
GTGCTTGATC CTGAACGTCA AGTTTACCTG CCTAAGATTA CAATCCGTAA GCACGGTATC
GATACACACT ACATGTTCTC ATATGACTTC TTCCAGTCTA CTGATTACCA GCGCATCGTT
AAGATGGGCT CTGAAATCAA TGGTCTAGTA GAAGATGGTG GCTATGTACA ACGTGGTGAG
CGTACTAAGG ATGTCACTAG CTTCGTTGAA GCATTAGATT GGTTAATGAA CGAATCTAAG
CGCGGCCTAT ACATCCAGCG TTATAAAGGA TTGGGTGAGA TGAACCCTGA GCAATTGTGG
GAAACTACAA TGGATCCTGA ATCTCGTCGT ATGCTACAAG TTACCATCGA AGATGCGATT
GGTGCTGACC AGTTGTTTAC CTGTTTGATG GGTGATCAGG TTGAGCCGCG TCGTGACTTT
ATCGAAGCCA ATGCTCTGAA TGTGGCGAAC CTCGACGTTT AA
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| Protein sequence | MNNRRENNMS ENSYDSSSIK VLKGLDAVRK RPGMYIGDTD DGTGLHHMVF EVVDNSIDEA
LAGHCNDVII TIHADGSVSV RDDGRGIPVS IHEEEGISAA EVIMTVLHAG GKFDDNSYKV
SGGLHGVGVS VVNALSSKLQ MTIRRDGKVY EQFYTHGVPD APIAPIGEAT KTGTEIRFWP
STETFTDVLF HFDILAKRVR ELSFLNSGVG IRLVDERDNR DEFFKYEGGI SAFVDYLNVN
KTPVNKEVFH FCQEREDGIT VEVAMQWNDG FQENIFCFTN NIPQRDGGTH LAGFRGALTR
NLNNYMEREG YNKKGKTAAT GDDAREGLTA VISVKVPDPK FSSQTKDKLV SSEVKSAVEQ
TMGEQLGDYL MEHPNEAKLI VGKIIDAARA REAARKAREM TRRKGALDLG GLPGKLADCQ
EKDPGLSEIY IVEGDSAGGS AKQGRNRKNQ AILPLKGKIL NVEKARFDKM LSSQEVATLI
TALGCGIGRD EYNPDKTRYH NIVIMTDADV DGSHIRTLLL TFFFRQMPEL IERGYVYIAQ
PPLYKVKKGK QEQYLKDDPA LTEYLTTQAL DNANIYPSQG APGMSGQPLE RLVNQYREVE
AIIARLEQRY PTNITDLMLY HPAITNEMLS DEAQIKAWAD VFVADLIDKE TGGILYSAEP
VLDPERQVYL PKITIRKHGI DTHYMFSYDF FQSTDYQRIV KMGSEINGLV EDGGYVQRGE
RTKDVTSFVE ALDWLMNESK RGLYIQRYKG LGEMNPEQLW ETTMDPESRR MLQVTIEDAI
GADQLFTCLM GDQVEPRRDF IEANALNVAN LDV
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