| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0002 |
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| Symbol | |
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| ID | 5660403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1628 |
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| End bp | 2728 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641234509 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_001499866 |
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| Protein GI | 157959832 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000267756 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTCT CAATTGATAG GGACGCCTTA CTAAAACCGC TGCAATTAGT CAGTGGTGCT
GTAGAGAGGC GACATAACTT GCCTATACTG GCAAACCTTT TGGTTGAAGT GAGTAATCAC
TCACTTAAGT TAACTGGAAC CGATTTAGAA GTCGAGTTAG TCGGCGAAGT TCAGCTCGAA
GGTGAGATCC TTGAGGGGCG TACCACGGTC CCAGCGAAAA AATTTTTAGA TATTGTTAAG
TCGCTACCTG ATCAGGTAGA GCTTAAGATT GAGCAGCAAG AAAACCGTCT GTTGTTACGT
TCGGGTCGTA GCCGTTTTAC TTTGGCGACC TTGCCTGCTG AAGAGTATCC AAATGTCGAT
GCCTTTGAGG CTGAGATTGA GTTTACCTTG AAGCAGGGCA CCATGAAGTC GTTGATCGAC
GCGACTCAGT TCTCTATGGC TAACCAGGAC GTGCGTTATT ACCTTAACGG ACTGTTATTG
GAAACCGAAG GCAATGTGCT GCGTGCGATT GCGACTGACG GGCACCGTTT GGCATTGAGC
CATCGAATGA TCGAGGCGTC ACTGCCTGAA AAGCAAGTGA TTGTGCCCCG CAAGGGCGTA
TTAGAGCTTA TGCGTTCGTT TGAAGCAGAC GATCTCGACG TAACGATTGC GATTGGTGAC
AATGCGATTA GAGCGACAAC GGCAACAGCA GTGTTTACCA GTAAACTTGT TGATGGGCGT
TTTCCTGATT ATCGTCGTGT ACTGCCAAAG GGTGGCGATA AAGTTGTTAT TGCGAGCCGA
TTACAGCTAA AACAAGCGTT ACTGCGCGCT TCTATTCTGT CGAATGAGAA GTTCCGTGGT
GTTCGTGTCC AGCTGGAAAA CAATTTAATC AAGATCACCG CTAATAACCC TGAACAGGAA
GAAGCGGAAG AGATCTTAGA TGTTGAATAT GAAAATACAC CATTAGAGAT AGGTTTTAAC
GTCAGTTACT TACTCGACGT TCTCAATAAT CTACCTTCAG ATGATGTACG CATTACCTTG
ATAGACGGTA ACTCAAGCGC GCTTATCGAC AACCACATAG AGCAAGATTC TATGTATGTT
GTTATGCCTA TGCGTTTGTA G
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| Protein sequence | MKFSIDRDAL LKPLQLVSGA VERRHNLPIL ANLLVEVSNH SLKLTGTDLE VELVGEVQLE
GEILEGRTTV PAKKFLDIVK SLPDQVELKI EQQENRLLLR SGRSRFTLAT LPAEEYPNVD
AFEAEIEFTL KQGTMKSLID ATQFSMANQD VRYYLNGLLL ETEGNVLRAI ATDGHRLALS
HRMIEASLPE KQVIVPRKGV LELMRSFEAD DLDVTIAIGD NAIRATTATA VFTSKLVDGR
FPDYRRVLPK GGDKVVIASR LQLKQALLRA SILSNEKFRG VRVQLENNLI KITANNPEQE
EAEEILDVEY ENTPLEIGFN VSYLLDVLNN LPSDDVRITL IDGNSSALID NHIEQDSMYV
VMPMRL
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