| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4896 |
|---|
| Symbol | |
|---|
| ID | 5603736 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 5432463 |
|---|
| End bp | 5433464 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640940472 |
|---|
| Product | transcriptional repressor RbsR |
|---|
| Protein accession | YP_001481116 |
|---|
| Protein GI | 157373127 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000156613 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000000782419 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGGCCACCA TGAAAGACGT CGCCCGCCTG GCGGGCGTTT CAACCTCGAC GGTCTCGCAC
GTCATTAATG ACAATCGCTT TGTCAGCGAC AGCGTGCGGG CCAAAGTCAT GGCGGCCGTT
GAACAACTGA ACTATGCGCC TTCTGCGCTG GCGCGCAGCC TCAAACTAAA CCAGACGCGT
ACCATCGGCA TGCTGGTTAC CTCCAGCAAT AACCCGTTTT ATGCCGAAGT CGTGCGCGGC
GTTGAGCGCA GTTGCTATGA ACGTGGCTAC AGTCTGATCC TGTGCAATAC CGAAGAAGAT
GCCGCACGCA TGAATCGCAA CATGGAGACG CTGTTGCAAA AACGCGTCGA TGGCTTGCTA
TTAATGTGCA CCGAAAATCA TCGGCCATCG CAGGACGCGC TGAGTCGTTA TCCTTCGTTG
CCGATCGTCA TGATGGATTG GGCGCCGTTC GAAGGGGCCA ACGATATCAT TCAGGACAAC
TCGCTGCTGG GCGGTGAGAT GGCGACCGAT CACCTGATCG CCCGTGGGTA TCGCAAGATT
GCCTGCATCG CCGGCCCACA GGATAAAACT ACCGCACGTC ATAGGCTGGA AGGCTACCGT
CGCGCCATGC AACGCGCCGG ATTGGCAGTC TTGCCGGGGT ACGAAGTGCA CTGCGATTTT
GAATTTGAAG GCGGCGTGGA TGCCATGAAG CAACTGCTGG CGCTGGCTGA ACCCCCGCAT
GCGGTATTCG CCGGTAACGA TGCGGTAGCC GTAGGTGCCT ATCAGGCTCT GTATCAGGCC
GGATTGTCGG TGCCGCAAGA CATGGCGGTG ATGGGCTACG ATGATATAGA GCTGGCCAAA
TATCTGGCCC CACCGTTAAG CACTATTCAC CAACCGAAAG ATTCACTGGG GGAGTTGGCG
ATTGATACGC TGATTAACCG CCTGCAGAAC CCGGACCGCG AAGCCCAGGT TCTGGTGTTG
ACCCCTGAGC TGGTGGAGCG TGCTTCGGTC GGTTACCGTT AA
|
|---|
| Protein sequence | MATMKDVARL AGVSTSTVSH VINDNRFVSD SVRAKVMAAV EQLNYAPSAL ARSLKLNQTR
TIGMLVTSSN NPFYAEVVRG VERSCYERGY SLILCNTEED AARMNRNMET LLQKRVDGLL
LMCTENHRPS QDALSRYPSL PIVMMDWAPF EGANDIIQDN SLLGGEMATD HLIARGYRKI
ACIAGPQDKT TARHRLEGYR RAMQRAGLAV LPGYEVHCDF EFEGGVDAMK QLLALAEPPH
AVFAGNDAVA VGAYQALYQA GLSVPQDMAV MGYDDIELAK YLAPPLSTIH QPKDSLGELA
IDTLINRLQN PDREAQVLVL TPELVERASV GYR
|
|---|
| |