Gene Spro_4878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4878 
Symbolrbn 
ID5602849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5404792 
End bp5405682 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content56% 
IMG OID640940450 
Productribonuclease BN 
Protein accessionYP_001481098 
Protein GI157373109 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000922798 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCATTTT TCCGCCGCAA GAAGCTGCCT TCTGCGATCA AACCCGGCGT CACCTTTGGG 
CGGCTGCTGA TCAAACGCGT CGATAGCGAT GGCCTGACTA TGTTGGCAGG CCATTTGGCT
TACGTTTCCC TACTGTCGCT GGTGCCACTG GTGACCGTGG TGTTCGCGCT GTTTGCCGCC
TTCCCGATGT TCTCCGATAT CAGTGTCCAA CTGAAGAGCT TTATCTTCTC CAACTTCATG
CCGGCCGCCG GCAACGTGAT TCAAAGTTAT CTGGAGCAGT TTGTCGCCAA CTCCAACAAG
ATGACCGCCG TCGGCACTTG CGGGCTGATT GTCACCGCGC TGTTGTTGAT CTCCTCGGTG
GACAGCGTGC TCAATACCAT CTGGCGCAGC AAAAATAAGC GTCCAATCGT GTTTTCTTTC
GCGGTGTACT GGATGGTACT GACCCTGGGC CCGCTGTTGG TCGGTGCCAG CATGGCGATC
AGCTCCTATT TGCTGTCGCT CAACTGGTTG GCGCAGAGCG GTGTCAACAG CCTGGTGGAT
CAGGTACTGC GTATATTTCC GCTGATCCTG TCATGGATAT CCTTCTGGCT GCTGTATTGC
ATTGTGCCGA CGGTGCGGGT GCCACCCAAG GATGCACTGA TCGGTGCGCT GGTGGCCGGG
GTGCTGTTTG AGCTGGGCAA GAAGGGTTTT GCCTTGTACA TCACCATGTT CCCGTCTTAC
CAGCTGATTT ACGGCGTGCT GGCGGTGATC CCCATTTTAT TCCTCTGGGT CTACTGGAGC
TGGTGTATCG TGTTACTCGG TGCGGAAATC ACGGTGACCA TTGGGGAATA CCGCGACTAC
CGCCAACAGA AGGCGGAACA ACAGGCTCAG CCACCAGAAG GGCAGTTATG A
 
Protein sequence
MSFFRRKKLP SAIKPGVTFG RLLIKRVDSD GLTMLAGHLA YVSLLSLVPL VTVVFALFAA 
FPMFSDISVQ LKSFIFSNFM PAAGNVIQSY LEQFVANSNK MTAVGTCGLI VTALLLISSV
DSVLNTIWRS KNKRPIVFSF AVYWMVLTLG PLLVGASMAI SSYLLSLNWL AQSGVNSLVD
QVLRIFPLIL SWISFWLLYC IVPTVRVPPK DALIGALVAG VLFELGKKGF ALYITMFPSY
QLIYGVLAVI PILFLWVYWS WCIVLLGAEI TVTIGEYRDY RQQKAEQQAQ PPEGQL