Gene Spro_4877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4877 
Symbol 
ID5602848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5404358 
End bp5404795 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content55% 
IMG OID640940449 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_001481097 
Protein GI157373108 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000295651 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTGCGT TAATTCAGCG GGTATTAAAT GCCAGCGTCA CGGTCGAAGG TCAGACAGTA 
GGCAACATCG GTCCAGGTTT GTTAGTGTTA TTGGGCGTGG AACAGGACGA TAACGAGCAG
AAGGCCGTTC GCCTGTGTGA GCGTGTATTG GGATACCGCA TCTTTGGCGA TGAGAACGAC
AAGATGAATC TCAATGTCCA ACAGGCAGGG GGCAGCCTGC TGGTGGTCTC GCAGTTCACG
CTGGTGGCCG ACACGCAAAA GGGGATGCGT CCGAGCTTCT CTCGCGGTGC GGTACCGCAG
GAGGCCGACC GGTTGTACCA ATATTTTGTT GGCCAGTGCC GCGAGCGCGG CATAGAAACC
CAAACCGGTG AGTTTGCGGC CGATATGAAA GTTGCGCTGG TGAACGACGG GCCAGTGACG
TTTTGGCTTC AAGTCTAA
 
Protein sequence
MIALIQRVLN ASVTVEGQTV GNIGPGLLVL LGVEQDDNEQ KAVRLCERVL GYRIFGDEND 
KMNLNVQQAG GSLLVVSQFT LVADTQKGMR PSFSRGAVPQ EADRLYQYFV GQCRERGIET
QTGEFAADMK VALVNDGPVT FWLQV