Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_4865 |
Symbol | |
ID | 5604608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 5386892 |
End bp | 5388463 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640940438 |
Product | major facilitator transporter |
Protein accession | YP_001481086 |
Protein GI | 157373097 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00809546 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCACCC CTTTACGTCT GCCAACCCTT CCCCCAGCCC TGTCTGAGCA CCCACAGCGT TGGGTTACCC TGTTCTCAGT CTGCCTCGCC GGATTGATCA TGCCGATTAA CTTTACTGGC CCGGCAGTCT CTCTACCCGC TATCGCCACC AGCTTGGGTG GCAGTGTCAT CGCCCTCAGT TGGGTCACTA ATGCCTTTAT GCTGACCTTT GGCTGCAGCC TGATGATTGC CGGTGCGCTC GCCGATCGCT TTGGCCGTAA ACGCGTGTTC ATCAGCGGCC TGATGGTGAT GACCCTAAGC TCACTGGCTA TGCTGATGGT GCAGGACATC ATCTCCTTTG ATTTGATCCG TGCGTTGCAG GGTATTGCCG CCGCAGCGGC GTTTGCCGGG GGAACCGCCG GCCTGGCTCA GGTATTCGAT GGCGCAGAAC GCGCCAAGGC CTTCAGCCTG CTGGGCACCA CCTTTGGCAT CGGTCTGGCA TTTGGCCCGC TGCTGGCAGG GTTTCTGGGG CAGCATTTTG GCTGGCACTC AATTTTTATC AGCGTGTCGC TGCTCAGTGC CATCGCCTTG TTCACCGGAA TGCGTTATAT GCATGAGTCG CGCGATCCTT CAGCGGCCAA ACTTGACTGG CCCGGCGCGA CCACTTTTAC GCTGGCTCTG ACGTTGTTGA CCTATGCCGT ACTGCAGGCC CCCGACAGCG GTTGGGGCAG CCGCGAAGTC TTCGTCCTGT TCAGCGGCGC GCTGCTTTTT ATGGTTGCCT TTATCCTGAT AGAGAATCGC GTGCGCAGGC CAATGCTTGA TCTGTCTTTA TTCCGTTATC CACGCTTTAT TGGCGTGCAG TTTTTGGCGG CTGCCCCGGC CTATTCCTAT GTGGTACTGC TGGTTTTACT CCCGCTGCGC TTTATTGGCA TCGAAGGTTA CAGCACCCTG GAGGCGGGTA TCATTATGTT CGCACTCTCA GCGCCAATGC TGGTACTGCC GATGTTGGCC GGCATGTTGG CTCACCGGTT TTCCGCCGGC GTCATTTCCA GCCTGGGCCT GCTGATCTGC GCCTTCGGCC TGCTATGGCT GGCGCAATAT TCGCCTGGCC AGCCGTTCCT GCTGCTTATC TTGCCGCTGT TGACCATTGG CTGTGGCATC AGCCTGCCCT GGGGATTAAT GGATGGCCTG GCGGTCAGCG TGGTACCGAA GGATCGCGCA GGCATGGCTA CGGGTATTTT TAGCACCATT CGGGTGGCGG GCGAAGGCAT CGCACTCGCC GTGGTGGGCG CATTGTTGGC CACTTTGGTT GAACAGCACC TACCGGGCAC CGCGCTGACT AACGCAGCCG CTGGTGCCCA TCGGCTGGCA ATGGGTGACC TACCGCAAGC GGCTGCATTG CTGAATATCG ATACTGCAAC GTTGAAGCAG AGCTACGAAG CCGCATTTCA TAACCTGCTG TATATTCTGG CGCTAATGAC AGCGATTTCA GCAGGCGTCG TTTTTATTTT CCTGCGCCAT GCCTTGCCTC CGCCGATCGC CAACACTTTG ACGACAACCG TAAACTCGCT TGTTGAGAAA CCTACGGAGT AA
|
Protein sequence | MTTPLRLPTL PPALSEHPQR WVTLFSVCLA GLIMPINFTG PAVSLPAIAT SLGGSVIALS WVTNAFMLTF GCSLMIAGAL ADRFGRKRVF ISGLMVMTLS SLAMLMVQDI ISFDLIRALQ GIAAAAAFAG GTAGLAQVFD GAERAKAFSL LGTTFGIGLA FGPLLAGFLG QHFGWHSIFI SVSLLSAIAL FTGMRYMHES RDPSAAKLDW PGATTFTLAL TLLTYAVLQA PDSGWGSREV FVLFSGALLF MVAFILIENR VRRPMLDLSL FRYPRFIGVQ FLAAAPAYSY VVLLVLLPLR FIGIEGYSTL EAGIIMFALS APMLVLPMLA GMLAHRFSAG VISSLGLLIC AFGLLWLAQY SPGQPFLLLI LPLLTIGCGI SLPWGLMDGL AVSVVPKDRA GMATGIFSTI RVAGEGIALA VVGALLATLV EQHLPGTALT NAAAGAHRLA MGDLPQAAAL LNIDTATLKQ SYEAAFHNLL YILALMTAIS AGVVFIFLRH ALPPPIANTL TTTVNSLVEK PTE
|
| |