| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4858 |
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| Symbol | |
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| ID | 5604032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 5379676 |
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| End bp | 5380566 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640940431 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001481079 |
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| Protein GI | 157373090 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.610122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00520466 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACCCG ACCTGCAGGA TCGTGTTGCG ATTATTACCG GAGCCGGAGG CGGGCTTGGC
CGAGCACACG CACATCTGCT AGCCCGTTAT GGTGCGAAAG TTGTGATCAA TGATATCGGG
CTGGGTGCCG ACAAGGTTGC CGAAGAAATC AACTCATCAG GAGGGGATGC CATTAGTTTC
CAAGCCTCTG TGACTGATGA AGAGAAAATA AAGGCCATGG TCACGGAAAC TATAGAACGG
TGGGGAAGGG TCGATATTCT GGTCAACAAT GCAGGCAACC TGCGTGACAA GACTTTTGCC
AAAATGACGT TAGATGATTT TCGCTCTGTG TTGGACGTAC ATCTAATGGG GGCAGTGATT
TGCACCAAGG CCGTATGGGA GCATATGCAT CGCCAAAAGT ATGGGCGCAT CGTGTTCACG
ACGTCCTCTT CTGGTCTTTA TGGCAATTTC GGGCAGGCCA ATTATGCAGC GGCGAAAATG
GGGCTGGTGG GGCTGATGCA AACACTGGCA CTCGAAGGAG CCAAGAGTAA CATTTTGGTG
AATTGTTTGG CGCCTACTGC AGCGACCGCT ATGAGCGATG GGCTTTTGAT GCCGCAAGCA
AAGCGTGTAT TACAACCTGA AGCAGTGAGC CCGGCACTGT TGCCGCTGGT TTCGCAGTGT
GCTCCTACCA GGGCTATTGT TTGCGCTGGT GCGGGTAATT TTGCGCGCGC CTACATAACG
TTGACCGGTG GACGCTTTTT GGGCAACGAC GCACATACCA TCAATCGTAT TTTCGCCGAC
TGGCAAGTGA TCGGCGATCG CGAATCAGAG CAAGTTCCTG AGTCTGCCAC TGCGCAGGTT
CATCAAGAAC TCATCGCTGC TTTCCGTTCA GAATCCGAAA ATAACCAGTG A
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| Protein sequence | MKPDLQDRVA IITGAGGGLG RAHAHLLARY GAKVVINDIG LGADKVAEEI NSSGGDAISF
QASVTDEEKI KAMVTETIER WGRVDILVNN AGNLRDKTFA KMTLDDFRSV LDVHLMGAVI
CTKAVWEHMH RQKYGRIVFT TSSSGLYGNF GQANYAAAKM GLVGLMQTLA LEGAKSNILV
NCLAPTAATA MSDGLLMPQA KRVLQPEAVS PALLPLVSQC APTRAIVCAG AGNFARAYIT
LTGGRFLGND AHTINRIFAD WQVIGDRESE QVPESATAQV HQELIAAFRS ESENNQ
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