Gene Spro_4852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4852 
Symbol 
ID5603166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5371371 
End bp5372618 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content56% 
IMG OID640940425 
ProductPqiA family integral membrane protein 
Protein accessionYP_001481073 
Protein GI157373084 
COG category[S] Function unknown 
COG ID[COG2995] Uncharacterized paraquat-inducible protein A 
TIGRFAM ID[TIGR00155] integral membrane protein, PqiA family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000220019 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTATGCC CGCAGTGCGA TTTACTGGTG GCGTTACCGC CCTTAAGCAC TGGCACCAAA 
GCGGTATGCT CACGTTGCAG TACGACTCTC AGCGCCCGCT GGGATGAACC GCGCAAGCGG
CCGATAGGTT ACGCCCTCAG TGCGCTGTTC ATGCTGCTGC TGGCCAATAT TTTCCCGTTT
ATCAATATGC GCGTTGCCGG CTTCGGTAAC GAAATCAAAC TGATTAATAT CCCTCAGGTG
ATGCTGGAGG AAAACTACAC CAGCATGGCC ACGCTGTTTA TGCTGCTCGT ACAACTGATC
CCCGCATTCT GCATGCTGGC TATCATTCTG CTGTGTGCCA GGGTGCGTAT GCCGCTGGTA
TTAAAAGAAT GGATGGCCAA GATGCTGTTC CAGTTTAAAA CCTGGTGCAT GGTGGAGGTC
TTCCTCGCTG GGGTGCTGGT CAGTTTCGTC AAGCTGATGG CCTATGGCGA TATCGGTATC
GGCAGCAGCT TTGTGCCTTA TTGCCTGTTC TGTCTGTTGC AAGTACGTGC CTTTCAGTGC
GTAGACCGCC GCTGTCTGTG GCAGGACATC GAACCGGCGC CGAAGCTGGA TTGTCCTTTA
ACGGTAGGAC GCACCGGCAT GCGCCAGGGC GTGCGCTCTT GCCGCTGCTG CACGGCTATC
CTGCCGGCCG ATCTGACCCA CTGCCCGCGC TGCCATACCA ATGGTTATGT ACGCCGCCGC
AATAGCCTGC AGTGGACGCT GGCGCTGCTG GCGACCTCGG TCATGCTGTA TATCCCGGCG
AACCTGATGC CGATCATGGT CACCGAGGCG CTGGGCAACA AAATGAATTC GACCATCATG
GCCGGGGTGA TCCTGCTGTG GGGAGAAGGC TCCTACCCGG TGGCGATGGT GATTTTCATC
GCCAGCATCA TGGTCCCGTC GCTGAAGATG CTGGCGATCG GCTGGCTGTG TTGGGACGCC
AACGGCAAAG GGAAAAACCG CGCCGACAGC GAACGCATGC ATCTGATTTA TGAAGTGGTC
GAATTCGTTG GCCGCTGGTC AATGATCGAC GTGTTTGTCA TCGCCGTACT GTCTGCTTTG
GTACATATAG GCCTATTGAT GAGCGTCTAT CCTGCAACCG GTGCGCTGCT ATTCGCTCTG
GTGGTGATCC TCACCATGTT CGCCGCCATG GCGTTCGACC CCCGGCTGAC CTGGGATCGC
GTAAACGAAA CAATAAAAAA GGAGCCGCAA GGTGACCGAA AACAATAA
 
Protein sequence
MLCPQCDLLV ALPPLSTGTK AVCSRCSTTL SARWDEPRKR PIGYALSALF MLLLANIFPF 
INMRVAGFGN EIKLINIPQV MLEENYTSMA TLFMLLVQLI PAFCMLAIIL LCARVRMPLV
LKEWMAKMLF QFKTWCMVEV FLAGVLVSFV KLMAYGDIGI GSSFVPYCLF CLLQVRAFQC
VDRRCLWQDI EPAPKLDCPL TVGRTGMRQG VRSCRCCTAI LPADLTHCPR CHTNGYVRRR
NSLQWTLALL ATSVMLYIPA NLMPIMVTEA LGNKMNSTIM AGVILLWGEG SYPVAMVIFI
ASIMVPSLKM LAIGWLCWDA NGKGKNRADS ERMHLIYEVV EFVGRWSMID VFVIAVLSAL
VHIGLLMSVY PATGALLFAL VVILTMFAAM AFDPRLTWDR VNETIKKEPQ GDRKQ