Gene Spro_4836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4836 
Symbol 
ID5602596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5356919 
End bp5358196 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content57% 
IMG OID640940409 
Product3-deoxy-D-manno-octulosonic-acid transferase 
Protein accessionYP_001481057 
Protein GI157373068 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1519] 3-deoxy-D-manno-octulosonic-acid transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00343908 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000493291 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTGCTGC GTTTATATCA GGTACTACTC TACCTCATCC AACCCCTGAT CTGGCTCCGC 
TTACTGTTGC GCAGCCGCAA AGCTCCAGCC TACCGTAAAC GCTGGGCAGA ACGCTATGGC
TTCTGCGCCG GAAAAGTCGT ACCGGGTGGC ATCATGCTGC ACTCCGTCTC CGTGGGTGAA
ACGCTGGCAG CCATCCCGTT GGTCCGCGCA CTGCGCCACC GTTACCCCTA TTTACCGATT
ACTGTGACCA CCATGACGCC GACTGGTTCA GAACGCGTGC AGTCCGCCTT CGGTAAAGAC
GTTCATCATG TTTATCTCCC TTACGACCTG CCAGGCTCGA TGCATCGTTT TCTGGATCAG
GTGAACCCCA AGCTGGTCAT CATCATGGAA ACCGAGCTGT GGCCCAATCT GATTAACGCC
CTGCATCAGC GTCAGATCCC TCTGGTCATT GCCAACGCCC GACTTTCCGC CCGCTCTGCC
GCAGGCTATA AAAAAATCGG CGGTTTTGTC CGCGATATGC TGCGCCGCAT TACGTTGATC
GCCGCGCAAA ATCAGGAAGA TGGCGAACGT TTTGTCGAAC TTGGCCTGAA ACGCTCACAA
CTGACCGTAA CCGGCAGCCT GAAATTCGAT ATTTCCGTTA CGCCTGAGCT GGCTGCGCGT
GCAATCACGT TACGCCGCCA ATGGGCGCCA CGTCGCCCGG TGTGGATCGC CACCAGCACC
CACGAAGGTG AAGAAAGCAT TCTGCTGGCC GCGCACCGTA AGCTACTGGA AAAACACCCT
GACCTGCTGC TGATCCTGGT GCCACGTCAC CCGGAACGCT TCGCTACGGC CAAAGAGCTG
GTGCAAAAAG CCGGCTTCAG CTACACCCTG CGCAGCAGTG GTGAAATCCC TTCCGGCGGT
ACCCAGGTGG TGATCGGCGA TACCATGGGC GAATTGATGC TGCTGTACGG CATTGCCGAT
CTGGCCTTCG TTGGCGGCAG CCTGGTGGAG CGCGGTGGAC ATAACCCGCT GGAAGCTGCT
GCGCACGCCA TCCCGGTGCT GATGGGGCCA CATATTTTCA ACTTCAAGGA TATCTGCGCC
AAGCTGTCAC AGGCCGAAGG TCTGATCACC GTGACCGATG AAGATTCACT GGTCAAGGAA
GTGGCTACGC TGCTCACCGA CGAAGACTAT CGCCGCTATT ACGGCCGCCA CGCGGTAGAA
GTGCTGTATC AAAACCAGGG AGCGCTGCAG CGCCTGCTGC AATTGTTAGA ACCGCATCTG
CCGCCCCGGA GTCATTAA
 
Protein sequence
MLLRLYQVLL YLIQPLIWLR LLLRSRKAPA YRKRWAERYG FCAGKVVPGG IMLHSVSVGE 
TLAAIPLVRA LRHRYPYLPI TVTTMTPTGS ERVQSAFGKD VHHVYLPYDL PGSMHRFLDQ
VNPKLVIIME TELWPNLINA LHQRQIPLVI ANARLSARSA AGYKKIGGFV RDMLRRITLI
AAQNQEDGER FVELGLKRSQ LTVTGSLKFD ISVTPELAAR AITLRRQWAP RRPVWIATST
HEGEESILLA AHRKLLEKHP DLLLILVPRH PERFATAKEL VQKAGFSYTL RSSGEIPSGG
TQVVIGDTMG ELMLLYGIAD LAFVGGSLVE RGGHNPLEAA AHAIPVLMGP HIFNFKDICA
KLSQAEGLIT VTDEDSLVKE VATLLTDEDY RRYYGRHAVE VLYQNQGALQ RLLQLLEPHL
PPRSH