| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4833 |
|---|
| Symbol | |
|---|
| ID | 5603469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 5353521 |
|---|
| End bp | 5354648 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640940406 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001481054 |
|---|
| Protein GI | 157373065 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.163337 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000460979 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAT TTCGTTTGGC GATCGTTCGC CAAAAATACC GCCCGGACGG TGGCGCTGAG
CGTTTCGTTT CCCGCGCCCT TGAGGCGCTG GAACAACAGG ACCTCGACCT GAACGTTATC
ACCCGCGAAT GGCAGGGTGA CGCCAATCCA AACTGGCATA TCCACCTGTG TAATCCGATA
AAATTCGGCC GCATCAGCCG TGAACGTGGC TTTGCCGAAG CGGCCAGAGC ACTGTGGCAG
AAAGAAAACT TCGATCTGGT GCAAAGCCAT GAACGCATCC CAGGCTGCGA TATTTACCGC
GCCGGTGATG GCGTGCATCG CCGCTGGTTA CTGCAGCGGG CTCGTTTGTT GCCGGAGTGG
CGTCGTAAAT GGCTGTTCTC CAATCGCTAT CACCGTTACG TGATGTGCGC AGAACGGGCA
ATGTACGCAG CGCCGGAGCT GAAGGCCGTT ATCTGCAATG CCGAAATGAT TAAGCAGGAA
ATCATCGATG ACTTCGGAGT CCCCGCCGAT AAAATCACGG TGATCTACAA TGCCATTGAT
AATCAAAAAT TTCCGCCCGC CGATGCCGAA CTACGCCAGC AGTTGCGTCT GCAGTATCAG
ATCCCGCAGC AGGCTCACTG CCTGGTTTTT GTCGGTTCCG GTTTTGAACG CAAAGGGCTG
GCCGCGGCCA TCCGTGCCGT CGCAGCGACC GACAGCTATC TGCTGGTGGT AGGTAAGGAT
AAGGCGGAAA AACGTTATCA GGCGCTGGCG CAATCACTGG GCTGCAGCGA TCGGGTGCGA
TTTATGGGGG TGCAGAAACA AACGCTGCCG TTCTATCAGG CCGCCGATGC GCTGTTGCTG
CCCACGTTGT ACGATCCGTT CCCCAACGTG ATTCTGGAAG CCATGTCCTG CGGTTTGCCG
GTCATTACCA GCACCACCTG CGGCGGCTCG GAGTTTATCA CTCAGGGGCA AAATGGCTTT
GTTACCGATG CCCTTGATGT CCCCGCGCTG GTCGCGGCGA TCGTAGCGCT ACCACGCCAG
GCCCTGGGCT CCGCCATGGG TGAGGCAGCA AGAGCGCGTA TCATGTCGGC TACCCCGGCG
CGCCTGTCGG AACAGCTGAT CTCCCTTTAT AACCGGCTGC TGGATTAA
|
|---|
| Protein sequence | MKAFRLAIVR QKYRPDGGAE RFVSRALEAL EQQDLDLNVI TREWQGDANP NWHIHLCNPI
KFGRISRERG FAEAARALWQ KENFDLVQSH ERIPGCDIYR AGDGVHRRWL LQRARLLPEW
RRKWLFSNRY HRYVMCAERA MYAAPELKAV ICNAEMIKQE IIDDFGVPAD KITVIYNAID
NQKFPPADAE LRQQLRLQYQ IPQQAHCLVF VGSGFERKGL AAAIRAVAAT DSYLLVVGKD
KAEKRYQALA QSLGCSDRVR FMGVQKQTLP FYQAADALLL PTLYDPFPNV ILEAMSCGLP
VITSTTCGGS EFITQGQNGF VTDALDVPAL VAAIVALPRQ ALGSAMGEAA RARIMSATPA
RLSEQLISLY NRLLD
|
|---|
| |