Gene Spro_4829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4829 
Symbol 
ID5606817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5348946 
End bp5350115 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content41% 
IMG OID640940402 
ProductO-antigen polymerase 
Protein accessionYP_001481050 
Protein GI157373061 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.126045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000506097 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAATATT CAAATAACCC TTACTACGTA CAAAAATTGT ATGTAGTATT TTTTTTCCTT 
TTTTCATTTT TCAGCGCTAT TTTCTATAGC TATACGAAAG TTAATAATTT ATTTCATCTT
TCAGCTATTT TTTTCGTCAT TACTCTTTAT TTCGATAAAG ACTTTCGGCT GACTTTCTTC
CGCAGCAATG AAATCCGTCG CGGCCTGGGT CTTACTGCTG CAATGCTTCT TTACTTTTCT
TTTAGCAACC TGTGGTCAAA CGATCCTGCC AATATCGAAT CAACCCTGAC GCACAGCGTT
TACCTGTTAA TTTATTTAGC CATGCTGATA TCCATACTTA ATGGGAATCA ACGTAACTTA
TTGTTTACAT TTGTTATTTT AGGGTTGGCG AGCCTGTGCC TGTTCTCAAT CACTTTTGAT
TATCACGATA TCTTGATCAG CAGACAAGTA TCAAAAAGTA ATCCAGGCCC AGAAAATGTG
ATTGATCTGG CAGGGTTAGC CGGAATCGGG GTGATACTAA GCCTGATCAT ATTTCGCGAA
AAAAAGAGTC GGATGATTTT GCTCACCATT CCAATATTTT TAGGCACGAT GTTGCTCACT
CAAAGCCGTG GGCCCGTGCT TTCCTTACTG ATTGCGATGC TGGTGGTATT ACCCTATAAA
CACTTGAGAC TCAAACATGT CGCCTGTTTC TTCATTGCCT TGATAGCCAT TGGGATAACT
ATTATTTCAT CCGAAATTGG GCAATTAGTG TTAGCCCGTT TTGAAGAGAT ACATGTGCAG
AGTTTCTTAC GTTTTAGCAT CTGGCTTCAT ACTTTCGACC TGGTAAGCCA AGCACCTTAT
TTTGGTTATG GTTTCAATTC AGAGCTGGCC TTCACCAATT ACTCTGGTGA AAATATAACC
ACTACACACA GCCTTTATTT GGGGTCATTA CTGAAGGGTG GTCTAGTCGG ATTGGGTATG
TTATTCGCGG TTTTGGGCTA TGGCTGCATA TTAACACTGC GACGCCGGCA CAACGGCATG
CGATTGGAAG CAGCGCTGTT TATTTTCATG CTGCTATTTT ATACCTCGCA GGGCATGTTC
ATCGTAGGTA ACCCATCTGA ATCATGGTAT CTATTCTGGT TCCCTTTGGG CGTCATTATG
TCCACCAGAC TGAAATCTCA CCTACCGTAA
 
Protein sequence
MKYSNNPYYV QKLYVVFFFL FSFFSAIFYS YTKVNNLFHL SAIFFVITLY FDKDFRLTFF 
RSNEIRRGLG LTAAMLLYFS FSNLWSNDPA NIESTLTHSV YLLIYLAMLI SILNGNQRNL
LFTFVILGLA SLCLFSITFD YHDILISRQV SKSNPGPENV IDLAGLAGIG VILSLIIFRE
KKSRMILLTI PIFLGTMLLT QSRGPVLSLL IAMLVVLPYK HLRLKHVACF FIALIAIGIT
IISSEIGQLV LARFEEIHVQ SFLRFSIWLH TFDLVSQAPY FGYGFNSELA FTNYSGENIT
TTHSLYLGSL LKGGLVGLGM LFAVLGYGCI LTLRRRHNGM RLEAALFIFM LLFYTSQGMF
IVGNPSESWY LFWFPLGVIM STRLKSHLP