Gene Spro_4828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4828 
Symbol 
ID5606816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5348060 
End bp5348962 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content43% 
IMG OID640940401 
Productputative lipopolysaccharide glycosyltransferase 
Protein accessionYP_001481049 
Protein GI157373060 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0588871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000203117 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGAACAT TCTTCAAGCA GATATATCGC TATACTCATA CTCGTCCTTT TCGGCATAAC 
GAAAACCTCT GGCCCTACGT AAAGATTAAA CGCGCTGCCA GCGGAGAAAT CGTCGAACTA
CGGTACAAAA AGCAACATGT ACCGCTAGAA CAGTTAGCCG ATTTAAAGGG ACAATTCGCT
GGTGATATCT TGCTAACAGC CACCGGTCCG TCGGTGAAAA ATCTTCACTT GGAAAAATTT
CCGAGCATGC CAGCAATGGG CGTCAATGGC GCTTATTTTC TGCACGATCG AGTGGATTTT
AGATTTTATG TCATTGTCGA TATTGGGTTT ATAGATCAAA AACCGGAGAT CATCAGCGAT
ATTATCGATG ATCAACGGCT GACGCTGTTT ACCACGGTGC ACAGCGTGGC TAAGATCATC
GACAGGTTCG GGCTGGAGCG AGTGAAATGC CGTCTTGCGG TGATAGAGGA CGCTGCATTC
AAAATCTATC AACCCAAAAT TACCAATGAT GAACTCTGGT CAGTCTACCA AGATAATCGT
GATGTCATTT TCGCCACTGA ACGAAAGGAT ATTGCCTTCA ATCATGATAT TCGCAGCGGC
GTCTTCGACG CTGGAACAGT AGCTTACTGG GCTTTACAGA TCCTGACTTT CTTAGGTTTT
GAACGGTTGT ATATTATTGG GCTGGATATG AATAACTTCC ACCAGCCACG ATTTTATGAG
GCTGCAGATA ATAAATTGCC AACTCAGCTC GAAAACAAGG TTACCGTGCA AGTTATGCCT
TCTTTCAGCC ATGCCAGCAA ATTGATGAAG GCCAAGAATA TTATTATAAA AAACCTTTCC
ATCACCAGTG CTATCAGTAA TGATATTTTC GACAAGGTCG ACCCGGATGA AATATTCAAA
TAA
 
Protein sequence
MGTFFKQIYR YTHTRPFRHN ENLWPYVKIK RAASGEIVEL RYKKQHVPLE QLADLKGQFA 
GDILLTATGP SVKNLHLEKF PSMPAMGVNG AYFLHDRVDF RFYVIVDIGF IDQKPEIISD
IIDDQRLTLF TTVHSVAKII DRFGLERVKC RLAVIEDAAF KIYQPKITND ELWSVYQDNR
DVIFATERKD IAFNHDIRSG VFDAGTVAYW ALQILTFLGF ERLYIIGLDM NNFHQPRFYE
AADNKLPTQL ENKVTVQVMP SFSHASKLMK AKNIIIKNLS ITSAISNDIF DKVDPDEIFK