Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_4828 |
Symbol | |
ID | 5606816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 5348060 |
End bp | 5348962 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640940401 |
Product | putative lipopolysaccharide glycosyltransferase |
Protein accession | YP_001481049 |
Protein GI | 157373060 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0588871 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000203117 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGAACAT TCTTCAAGCA GATATATCGC TATACTCATA CTCGTCCTTT TCGGCATAAC GAAAACCTCT GGCCCTACGT AAAGATTAAA CGCGCTGCCA GCGGAGAAAT CGTCGAACTA CGGTACAAAA AGCAACATGT ACCGCTAGAA CAGTTAGCCG ATTTAAAGGG ACAATTCGCT GGTGATATCT TGCTAACAGC CACCGGTCCG TCGGTGAAAA ATCTTCACTT GGAAAAATTT CCGAGCATGC CAGCAATGGG CGTCAATGGC GCTTATTTTC TGCACGATCG AGTGGATTTT AGATTTTATG TCATTGTCGA TATTGGGTTT ATAGATCAAA AACCGGAGAT CATCAGCGAT ATTATCGATG ATCAACGGCT GACGCTGTTT ACCACGGTGC ACAGCGTGGC TAAGATCATC GACAGGTTCG GGCTGGAGCG AGTGAAATGC CGTCTTGCGG TGATAGAGGA CGCTGCATTC AAAATCTATC AACCCAAAAT TACCAATGAT GAACTCTGGT CAGTCTACCA AGATAATCGT GATGTCATTT TCGCCACTGA ACGAAAGGAT ATTGCCTTCA ATCATGATAT TCGCAGCGGC GTCTTCGACG CTGGAACAGT AGCTTACTGG GCTTTACAGA TCCTGACTTT CTTAGGTTTT GAACGGTTGT ATATTATTGG GCTGGATATG AATAACTTCC ACCAGCCACG ATTTTATGAG GCTGCAGATA ATAAATTGCC AACTCAGCTC GAAAACAAGG TTACCGTGCA AGTTATGCCT TCTTTCAGCC ATGCCAGCAA ATTGATGAAG GCCAAGAATA TTATTATAAA AAACCTTTCC ATCACCAGTG CTATCAGTAA TGATATTTTC GACAAGGTCG ACCCGGATGA AATATTCAAA TAA
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Protein sequence | MGTFFKQIYR YTHTRPFRHN ENLWPYVKIK RAASGEIVEL RYKKQHVPLE QLADLKGQFA GDILLTATGP SVKNLHLEKF PSMPAMGVNG AYFLHDRVDF RFYVIVDIGF IDQKPEIISD IIDDQRLTLF TTVHSVAKII DRFGLERVKC RLAVIEDAAF KIYQPKITND ELWSVYQDNR DVIFATERKD IAFNHDIRSG VFDAGTVAYW ALQILTFLGF ERLYIIGLDM NNFHQPRFYE AADNKLPTQL ENKVTVQVMP SFSHASKLMK AKNIIIKNLS ITSAISNDIF DKVDPDEIFK
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