| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4823 |
|---|
| Symbol | tdh |
|---|
| ID | 5606066 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 5342615 |
|---|
| End bp | 5343640 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640940396 |
|---|
| Product | L-threonine 3-dehydrogenase |
|---|
| Protein accession | YP_001481044 |
|---|
| Protein GI | 157373055 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | [TIGR00692] L-threonine 3-dehydrogenase
[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000204753 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAT TGTCAAAACT GAAAGCGGAA GAAGGGATTT GGATGACCGA TGTGCCTCAG
CCGGAGCTGG GCCATAACGA CATCATGATT AAAATCCGTA AAACTGCGAT CTGCGGTACC
GATGTTCATA TTTATAACTG GGATGAATGG TCACAGAAAA CCATCCCGGT CCCTATGGTG
GTCGGCCACG AATATGTGGG TGAAGTGGTC GCCATCGGCC AGGAAGTCAA AGGCTTCACT
GTCGGTGACC GCGTTTCCGG CGAAGGCCAT ATCACCTGTG GCCATTGCCG TAACTGCCGT
GGTGGCCGTA CGCACCTGTG TCGCAACACC ACCGGCGTGG GCGTGAACCG TCCAGGCTCA
TTTGCTGAAT ATCTGGTGAT CCCGGCGTTT AACGCCTTCA AAATCCCGGA CAATATTTCC
GATGAGCTGG CGTCTATCTT CGACCCGTTC GGCAATGCGG TTCACACCGC GCTGTCGTTT
GATCTGGTTG GCGAAGACGT GCTGGTTTCC GGTGCCGGGC CGATCGGCAT CATGGCGGCG
GCGGTGTGCA AGCACGTTGG CGCCCGCCAT GTGGTGATCA CCGACGTTAA CGAATACCGC
CTGGATCTGG CGCGCAAAAT GGGCGTGACC CGTGCGGTGA ACGTCAGCAA AGAAAACCTG
AATGACGTGA TGGCCGAACT GGGCATGACC GAAGGGTTTG ACGTTGGGCT GGAAATGTCC
GGTGCGCCAC CGGCGTTCCG TACCTTGCTC AATGCGATGA ACCACGGCGG GCGTATTGCC
ATGCTGGGTA TTCCACCGTC GGATATGTCG ATCGACTGGA ATCAGGTGAT CTTCAAGGGG
CTGTTTATCA AAGGGATTTA CGGCCGTGAA ATGTTTGAGA CCTGGTACAA GATGGCAGCG
CTGATCCAGT CTGGCCTGGA TCTGACACCT ATCATCACTC ACCGTTTCAC AATCGACCAG
TTCCAACAAG GCTTTGACGC CATGCGCTCC GGCCAGTCCG GCAAAGTGGT TTTGAGCTGG
GATTAG
|
|---|
| Protein sequence | MKALSKLKAE EGIWMTDVPQ PELGHNDIMI KIRKTAICGT DVHIYNWDEW SQKTIPVPMV
VGHEYVGEVV AIGQEVKGFT VGDRVSGEGH ITCGHCRNCR GGRTHLCRNT TGVGVNRPGS
FAEYLVIPAF NAFKIPDNIS DELASIFDPF GNAVHTALSF DLVGEDVLVS GAGPIGIMAA
AVCKHVGARH VVITDVNEYR LDLARKMGVT RAVNVSKENL NDVMAELGMT EGFDVGLEMS
GAPPAFRTLL NAMNHGGRIA MLGIPPSDMS IDWNQVIFKG LFIKGIYGRE MFETWYKMAA
LIQSGLDLTP IITHRFTIDQ FQQGFDAMRS GQSGKVVLSW D
|
|---|
| |